Detail



ID : Ahg490601

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|490601|fgenesh2_kg.7__34__AT4G38390.1
Sequence
TTTGTCCATA GTTTCTCGGC AACCAACTTC TCCTCTGCCT TAACGTCATC GAGAAATGGC GTCGTCTTCT TCTTCCTCCG CCTCCTCCTT TTGCACTCTC TCCTTCCCAT TTCTCTTGTT TTCTTCCTAT TCTTTGTAGC CTATCGTCCT CCTTCCTTCA TTATCGTCGT TCTACAATTA ATTAATGGCC TCTTTGAAGT TGAAGAAAAG GGATAATGGC GCTGAACCCG ACAAGAAAAA GTTGGTCATC GCAGGAATTC GCCACCAGTT ACTGCTTCTC CTTCGCCGCC GTCACCGTCT ATTTCCGCTG GTATCTGCCG TCTCCGGCTG TATCCTCCTC ATCCTCTTCT CATTCTCGGC CCTTTCTCCT CCTCCATTGA TCCATCACAA CAATCAAGTG GCCGTGGAAC CCAATCCAGA TCCAACCACC ACTCCATTTC GTGAAAATGG TGGAAGGTCG GATCGCCAGT TATGGAGCTC GAGATTGTCC AACTTCTACT ATGCCTGCAG CAATGCAACT GACACCTTTC AAGTTACTGA TAAGACAAGG CAAACCAATC GGTATTTACT TATCGCGACA AGCGGAGGTT TAAACCAGCA ACGGACAGGG ATCATAGATG CTGTAGTTGC CGCATACATT CTAAACGCCA CTCTTGTGGT CCCTAAACTT GACCAGAAGT CCTACTGGAA GGACACCAGC AACTTTGAGG ATATATTTGA TGTTGATTGG TTCATTTCGC ATCTCTCCAA AGACGTCAAG ATCATCAAGG AGCTTCCTAA AGAAGAGCAG TCAAGAATAT CCACCAGCCT ACAGTCAATG CGTGTCCCAA GGAAATGCAC ACCTTCTTGC TACTTGCAGC GTGTTTTGCC CATTCTTAAT AAGAAACATG TTGTACAACT CTCCAAATTC GATTACAGGC TGTCCAACAA TCTTGATACA GAGCTCCAGA AACTGCGTTG TAGAGTGAAC TACCATGCGG TGAGATATAC AGAGTCTATC AACAGGATGG GCCAATTGTT GGTTGACCGG ATGAGAAAAA AGGCCAAATA TTTCGTTGCC CTTCATCTCA GGTTCGAACC TGATATGCTG GCCTTCTCCG GGTGCTATTA CGGCGGTGGT CAAAAAGAGA GACTCGAACT CGGAGCTATG AGAAGAAGGT GGAAAACGTT ACATGCGGCA AACCCTGAAA AGGTACGGCG GCACGGGAGA TGTCCCCTGA CGCCAGAGGA GATTGGTCTG ATGCTCAGAG GCTTAGGTTT TGGGAAAGAG GTTCACTTGT ACGTTGCATC AGGCGAGGTA TACGGAGGGG AGGTTACATT GGCACCGTTA AGAGCTCTGT TTCCAAATCT CCATACAAAA GAGACACTGA CCTCCAAGAA AGAACTGGCT CCGTTTGCAA ACTTCTCATC ACGCATGGCT GCTCTTGACT TCATTGTCTG TGATAAGAGC GACGCATTTG TCACCAACAA CAACGGCAAC ATGGCTAGAA TCTTAGCTGG GAGAAGGAGA TACTTGGGGC ACAAAGTGAC CATCCGTCCA AACGCCAAGA AACTCTACGA GCTCTTCAAA AATAGACACA ACATGACATG GGATGATTTC TCATCCAAGG TCCGAAGATA CCAGACGGGT TTCATGGGGG AACCAGATGA AATGAAACCA GGAGAGGGCG AGTTCCATGA GAACCCAGCC TCCTGCATTT GTCGAACCTC TGAAGCAAGA GTCGTGAAAA AAAAAGCAAA ACATGTAAAT GAGGATGACT CATCGGAGTA CTCAGACATT GGCAATGTCC CCATAGCTAG TGGAAGCGAT TTGGATCACT CACAAGTTGA TGAAGAGATC TTCTGA 
Length1846
Protein Sequence
Protein Residue
Map Locationscaffold_7: 89641.. 92176
Download Sequence
A.thaliana
AGI-codeAT4G38390.1
Descriptionroot hair specific 17
TAIR curator summary
Alias[RHS17][root hair specific 17]
Gene coexpression
MR
MR Locus Description
6.9282 Ahg312489 Polyketide cyclase/dehydrase and lipid transport superfamily protein
14.2829 Ahg494175 MATE efflux family protein
16.1555 Ahg471893 Curculin-like (mannose-binding) lectin family protein
16.5831 Ahg937175 TCP domain protein 16
17.3205 Ahg912755
17.3205 Ahg900312
17.3781 Ahg331706 oligopeptide transporter 9
17.7482 Ahg896878 putative pentacyclic triterpene synthase 3
23.9165 Ahg906766
25.1396 Ahg904679
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression