Detail



ID : Ahg490820

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|490820|fgenesh2_kg.7__253__AT4G37940.1
Sequence
ATGGGAAGAG GGAAGATTGT GATCCAAAGG ATCGATGATT CAACGAGTAG ACAAGTCACT TTCTCCAAAC GAAGAAAGGG TCTTATCAAG AAAGCCAAAG AGCTAGCTAT TCTCTGCGAC GCCGAGGTCG GTCTCATCAT CTTCTCTAGC ACCGGAAAGC TCTATGACTT TGCAAGCTCC AGTATGGAGT CGGTTATTGA TAGATACAAC AAGAGCAAGA TCGAGCAACA ACAACTAATG AACCCCGCAT CAGAAGTCAA GTTTTGGCAG AGAGAAGCTG CTGTTCTAAG GCAAGAATTG CATGCTTTGC AAGAAAATCA TCGCAGGCAA ATGATGGGAG AACAACTAAA TGGTTTAAGC GTTAACGAGC TAAACAGTCT TGAAAATCAA CTTGAAATAA GTTTACGTGG AATTCGTATG AAAAAGGAAC AAATGTTGAC TCAAGAAATC CAAGAACTAA GCCAAAAGAG GAATCTCATT CGTCAGGAAA ACCTCGATTT ATCTAGGAAA GTACAACGGA TTCATCAAGA AAATGTGGAG CTCTACAAGA AGGCTTATAC GGAAAACACA AACGGGTTTA TACATCATGA GCTAGCTGTC GCGGATGATG AATCACACAC TCAGATTCGG CTGCAACTAA GCCAACCTGA GCATTCCGAT TATGAGACCC CACATCAAGA TTGA 
Length684
Protein Sequence
Protein Residue
Map Locationscaffold_7: 947511.. 950606
Download Sequence
A.thaliana
AGI-codeAT4G37940.1
DescriptionAGAMOUS-like 21
TAIR curator summaryencodes a MADS box protein, highly expressed in the root.
Alias[AGL21][AGAMOUS-like 21]
Gene coexpression
MR
MR Locus Description
10.3923 Ahg349579 F-box/RNI-like superfamily protein
11.225 Ahg948998
14.4222 Ahg316296 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein
16.7332 Ahg895742
19.1833 Ahg907079
29.7489 Ahg892759 Defensin-like (DEFL) family protein
30.5941 Ahg948620
31.4643 Ahg922876
32.7719 Ahg907426
39.1152 Ahg929450
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression