Detail


ID : Ahg349579

Blast(Query):  A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|349579|fgenesh1_pg.C_scaffold_6000172
Sequence
ATGGAAGAGG AATACCACGC CACCGTCGCT GTAGGAAACC CTAGCGACCG TTTTGATCGT CCTCTCGAAA TTAGACGATC AAGTGATTCA AGCGATGGTA TAGACATAAT CAGCGATCTA CCCGACGCGG TTCTCCAACA TATCTTCTCC TATATTCCGA CAAAGTTTGC TATCAGAACA TCCGTCTTGT CAAAACGATG GAGACATGTA TGGTCCGAGA CACCTCATCT CTCCTTTGGT TGGTTCAGTG GTTCCCCTAA ATTGATAAAC AAAACCCTAG CCAGCTACTC GGCTTCCAAA ATCACGAGTT TCCATCTCTG TACCCGTTAC TGCTACAAGG CTAACCATGT TAATAGCTCG ATCGAGTTTG CAATGTCTCA CAACGTTGAG AATCTTTCTC TGACGATCAG TAATCTCACA AGGAGTTATT GTTTTCCTGA TCTTTTCTTC ACCAACTCCT CTGTGAAGCA ACTCTTGGTC AATTTGCAAC ATCTTTACAC CAAAAAAAAA AAAAAAATGC CTTTTGTGAA TTTGAGTCCC GGATGCACCG TTTCTTGGAC ATCACTAAAG AACTTGTCTT TAAGCTCTTG TAAACTCTCT GATGATTCCT TACTTAAGAT TCTGTCTGGT TGTCCAATCC TGGAAACCTT GAGTTTGAAG TTTTGTATCT CACTCATGTA TGTTGATCTG AGTAAATCGC TGCGCTTGAC AAGATTGGAG ATAGAACGCC GCAACCCTTT TCCAGAACCA ATGCAGATTG TGGCGCCACA TGTCCGTTAT TTGAGATTGA GAGACTCTGA GGCACAATGC ACCTTACTTG ATGTCTCTTC TTTAACAGAA GCTAATGTAG ACTTTACCGA TTTTCATCCT AGAACCCTTT ATCATGGTTT TGAGCCCTTA GACCCTAGTG TTCTTCTAGT CACGGTGCAA ACGATGCTAG AACAGTTTCA GAACGTAGAG AAGCTTACTT TGGGGGTTAA CTTTCTTCAG ATGTTATCTC TTTCCAAGAT CCCTAGTCTT CCATTACCGA CGCTCAAAGT CAAAAATCTG ACTCTTGAAA CAAGGATTAT GCCAACTGTG GTTCCTGGTA TAACAAGGCT ATTACAAAAC TCACCTGGAT TAGAGAAGTT AACAGTACTT TACACAATTG ACGAGTGCAG CATCTTACTG TGGGAGTGTG TCAACAGCTA CTTGAAGAAG CAATTGAAAG ATGTGGCCTT TCTCTTTCCG TGGGAGTATG AAGTTATAAA GCCGAAAGTC ATGGCTTCGT TCATGGAACT TTTGCTGGCA AACACAAAAA CGCTAGAGAC ATTGGTTTTA CATTTGGGAA GTTGCATTAA TAGATCAAGA TTTGAAGAGC TGTCTCAAAT CGCTCTCACG CTTTCTCATA ACAATAAGGT CTCAATTCTG CTCAAGCGAA GCGGTGGCTG A
Length1431
Protein Sequence
Protein Residue
Map Locationscaffold_6: 775992.. 778968
Download Sequence
A.thaliana
AGI-codeAT5G02930.1
DescriptionF-box/RNI-like superfamily protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
5.09902 Ahg942700 low-molecular-weight cysteine-rich 36
10.3923 Ahg490820 AGAMOUS-like 21
13.2288 Ahg892908 elicitor peptide 7 precursor
13.5647 Ahg949041
14.8997 Ahg495305 actin depolymerizing factor 10
18.1108 Ahg922987 Galactosyltransferase family protein
18.1659 Ahg936444 LETM1-like protein
18.9737 Ahg922876
21.6333 Ahg937738
24.6779 Ahg930677 F-box and associated interaction domains-containing protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression