Detail



ID : Ahg490979

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|490979|fgenesh2_kg.7__412__AT4G36580.1
Sequence
AAATCCATGG CTGCTTCTAG ATTGTGTTCC GCGGCGGCGA TAGCTGCTGC GTTCACTTCA ATGTCGATGT CACAGAACCG TGCGTACGCC GATTCTCGAT TCCGGTTTCC TTTCTATTCT TCTTCTCCTC CTCCGTCAGA TTCTCCGGCG AATCAATCTT CTTCGAACTC TAGTAAGTCT AAACCAGAGG CTGATGAGCC TAAAGGATCG GGTTTTGATC CTGAGTCCCT TGAGAGAGCT GCAAAAGCTC TTAGAGATAT CAATAGCTCT CCCCATTCCA AACAGGTGTT TGATCTCATG AGGAAGCAGG AGAAAACTCG GTTAGCTGAA TTAGCGGCAG AGTCTTCTCA ATACGAAGCT ATTCAAGCAC ACAGAGATAT TGAGAGACAA CAGAAATTGG CTGAGGACCA GAGAAATCTT TTGCAGACAC AGGCGCAAAC CAAAGCGCAA ATTCTGCGAT ATGAGGATGA ATTAGCCAGA AAGAGACAGC AGACAGATCA TGAAGCTCAG AGACATCATA ATGTGGAATT GGTTAAGATG CAAGAGGCGT CTTCTATCAG GAAAGAGAGG GCAAAAATCG CCACAGAAGA ACAGATCCAA GCTCAGCATC GCCAAACTGA GAAAGAGAGA GCTGAACTTG AGCGAGAGAC GATTCGTGTC AAGGCCATGG CTGAAGCTGA AGGTCGGGCT CATGAAGCCA AACTTACTGA AGAGCAAAAC AGAAGATTGC TTCTGGAAAG GATTAATGGT GAAAGGGAGA AGTGGCTTGC TGCAATCAAC ACCATGTTCA GTCACATCGA AGGGGGATTC AGGACCTTAT TAACCGATCG AAATAAGCTG ATTATGACTG TTGGAGGAGC TACTGCATTA GCTGCAGGGA TTTATACAAC TCGGATGCTT GGACAACCAT CACTTATTCG AGAATCTTCC ATGGGTAGAT TTCCATGGGC AGGCTCAATG TCTCAATTGA AGAACAGAAT CTCAGGTGCA GCAGCAGCAT CTGCAGCAGA AGGGAAAAAG CCACTTGATA ATGTAATTCT CCATACTTCT TTGAAGAAAC GAATCGAGCA TCTCGCTAGA GCTACAGCAA ATACCAAATC CCATCAAGCA CCATTCCGCA ACATGATGTT TTATGGACCT CCTGGTACCG GTAAAACTAT GGTCGCAAGG GAAATAGCTC GAAAATCGGG TCTGGATTAT GCTATGATGA CAGGTGGAGA TGTTGCTCCC TTGGGATCAC AAGCTGTTAC TAAAATCCAT CAGATATTTG ATTGGGCCAA GAAATCGAAC AAAGGCTTAC TTCTTTTCAT TGATGAAGCC GATGCTTTTC TATGCAGGCG TAACAGCACT TACATGAGTG AGGCTCAACG TAGTGCTCTG AATGCTTTGC TCTTCCGAAC CGGTGATCAA TCTCGGGACA TTGTTCTTGT CTTAGCTACA AACAGACCTG GAGATCTCGA TAGTGCGGTT ACAGACAGGA TTGATGAAGT CATTGAGTTC CCACTTCCAG GGGAAGAAGA ACGTTTCAAG CTTCTCAATC TCTATCTCAA TAAATATCTA AAGAGGGGTG ACAACAACAA AGACACAAAA CCGAAATGGA GTCATTTGTT TAAGAAGCTG TCACAGAAGA TTACCGTTGA AGCAGACCTA ACTGATAAAG TGATTTCTGA GGCTGCGAAG AAGACGGAAG GATTCTCTGG CCGTGAAATT GCAAAGCTTG TGGCCGGAGT ACAAGCTGGA GTGTACGGAC GAGAGGATTG TGTATTGGAT TCACAGCTTT TCAAAGAGAT TGTTGAATAT AAGGTTGAAG AACATCACCA AAGGCTTAGG CTTGCTTCTG AAGGTTTTCA ACCATTACTC TTCTCTTAG 
Length1869
Protein Sequence
Protein Residue
Map Locationscaffold_7: 1658598.. 1661373
Download Sequence
A.thaliana
AGI-codeAT4G36580.1
DescriptionAAA-type ATPase family protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
5.38516 Ahg492045 3'-5'-exoribonuclease family protein
14.4914 Ahg950033 SPFH/Band 7/PHB domain-containing membrane-associated protein family
27.1662 Ahg478647 NOP56-like pre RNA processing ribonucleoprotein
29.2404 Ahg495181 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
35.7911 Ahg325778 Transducin/WD40 repeat-like superfamily protein
36.4692 Ahg893605 AAA-type ATPase family protein
37.47 Ahg488419 Alpha-L RNA-binding motif/Ribosomal protein S4 family protein
40.6202 Ahg488841 transferases;nucleotidyltransferases
45.0777 Ahg479744 putative mitochondrial RNA helicase 1
49.051 Ahg925362 Transducin/WD40 repeat-like superfamily protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression