Detail



ID : Ahg893605

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|893605|Al_scaffold_0006_1601
Sequence
ATGGCTCAGA AACTTGCGAT TGGTGTGATC TCAGCCCTAG CTGCCTCCGC TTCTCTCGCG CCGTCGAAAT TCGCTGCTGC AGATGGACCT TTCACTTTCT CCGGCTTCTC CACCTCTCCG TCTGCTTCGA TTCCTCAGCA ACAAGTTTCT TCTCCGCCGG CGTCGGAATC TGGAAAAGAA CCGTCTGTTA CTGGCGAAGA ATCTGATGCT CCTCCTCGGA TTCAGAACAA TAATCCGAGA ACAACTTCAG CTGGATTTGA TCCGGAAGCG CTTGAGCGAG GAGCAAAGGC CTTGAAGGGG ATCAACAACT CAGCTCATGC CAAAAAGGTA TTTGAAAGTA TTAAGACTCA AGAAGAGACG AGGCAGGCTG AGTTTACCGC TAAGGCGCAG GAGTTTAAAG CTATGCAATC CCAAGCTGAA GCTGAGAGGC AAAGGGTAAT ATATGAGGAA CAGAAGAAAC TTGCTCAGCA CCAAGCACAA ACAAAATCAC AGATGGCCCG CTATGAAGAT GAGTTAGCAA GAAAAAGGAT GCAGGCTGAG AATGAGGCCC AGAGAACAAG AAACCAAGAA CTTGTGAAAA TGCAGGAAGA ATCAGCAATT AGGCGGGAAG TAGCTCGACG AGCTACTGAA GAAGAGATTC AAGCACAGAG ACGACAAACA GAGAGGGAGA AAGCTGAGAT TGAACGTGAG ACAATCAGGG TCAAAGCTAT GGCAGAAGCT GAAGGGAGAG CTCGTGAATC AAAGCTTTCT GAGGATGTTA ACAGGAGAAT GCTTGTTGAT CGTGCAAATG CAGAAAGAGA GAAATGGGTT TCTGCCATCA ATACTACATT CGATCATATT GGAGGGGGCT TGCGTACCAT TCTAACGGAT CAAAATAAGC TAATTGTTGC TGTTGGAGGT CTAACCGCTC TTGCAGCTGG GATCTACACA ACGAGAGAAG GTGCCAAGGT TATCTGGAGC TACGTGGATA GAATATTAGG ACAACCTTCT CTAATTAGAG AATCATCAAG AGGAAAGTAC CCTTGGTCTG GTTCCGCTTC TCGTGTCTTG TCCACATTGC GGGGTGGTGG TAAGGAGTCT ACTTCCAAAA ATGGAAAAGG GTTTGGTGAT GTTATTTTGC GTCCTGCTCT TGAAAAGAGA ATCGAACAGC TAGCTAATGC AACTGCCAAC ACAAAAGCCC ACCAAGCACC TTTCCGAAAT ATACTTTTCT ACGGTCCACC AGGAACAGGG AAGACAATGG CTGCCCGAGA GCTGGCTCGT AGATCTGGTC TAGATTATGC ATTGATGACG GGTGGAGATG TTGCTCCACT TGGAGCTCAG GCTGTAACAA AGATACACCA ACTGTTTGAC TGGTCCAAAA AATCTAAGAG AGGCTTGTTG CTCTTCATCG ATGAAGCCGA TGCATTTTTA TGCGAGCGTA ACAAAACATA CATGAGCGAA GCCCAAAGGA GTGCACTAAA TGCACTCCTC TTCCGCACGG GTGACCAGTC CAAAGACATA GTCCTAGCGC TTGCCACAAA CAGACCTGGT GATCTAGACT CAGCAGTGTC TGACCGTATC GATGAGACGC TTGAGTTCCC CTTGCCTGGA GAAGAAGAGC GCTTCAAGCT TCTAAACCTC TACCTAGAAA AGTACATATC TAAGGCTAAT CTAAAAAAGC CGGGTTTGCT CCAAAGCCTT TTCAAAAAAG AGCAGCAGAA AATTGGGATA AAAGGCATTA CTGAGGATCT CCTGAAAGAA GCTGCCGCCA AAACAAAAGG GTTTTCAGGT AGAGAAATCG CGAAATTGAT GGCAAGCGTT CAAGCTGCTG TGTATGGAAG CGCAAACTGC TTATTGGACG CAACCCTTTT CAGAGAGGTC ATTGATTACA AAGTCGCAGA GCATCAACAG AGAAAAAAAC TAGCTGGAAC CGATGCAGGT AACAAGAAAT GA 
Length1932
Protein Sequence
Protein Residue
Map Locationscaffold_6: 6642719.. 6645784
Download Sequence
A.thaliana
AGI-codeAT5G16930.1
DescriptionAAA-type ATPase family protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
3.31662 Ahg479673 transducin family protein / WD-40 repeat family protein
3.4641 Ahg340454 P-loop containing nucleoside triphosphate hydrolases superfamily protein
4.12311 Ahg474417 Ribosomal RNA processing Brix domain protein
4.58258 Ahg480841 Transducin/WD40 repeat-like superfamily protein
5.91608 Ahg940355 DEA(D/H)-box RNA helicase family protein
6 Ahg892406 DEA(D/H)-box RNA helicase family protein
7.28011 Ahg482095 Eukaryotic protein of unknown function (DUF842)
8.3666 Ahg482032 elongation factor family protein
8.3666 Ahg937676 Ribosomal protein S5 domain 2-like superfamily protein
8.544 Ahg901566 Translin family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression