Detail



ID : Ahg491571

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|491571|fgenesh2_kg.7__1004__AT5G27100.1
Sequence
AAAATGAAGA GACAAAACAA CCTCGTTCTC AGCTTGCTCT TCTTTGTCAT CGTCTTCCTG ATGCAAGTCG GAGAAGCACA AAAGAGGGCA ACCGATGTAA ATGTGGGGAT CGTGAACGAT GTCGGAATGG CATACTCCAA CATGACTTTG CTCTGTATCA ACATGTCTCT CTCTGATTTC TACTCTTCTC ATACAGAAAC CCAGACAAGG CTTGTAACCA CCATTGTGAC TCCAAAAATG ATGTTGTTAT CGCAGCAGCA GCGGGAAGTG AAAGCGATTC TAGGGCCATG GACTTCGATG CAGGCTCAAT TCATGATTGA GATGGGACAA AAATCTCAGG TGCCGATTGT TACATATTCT GCAACAAGTC CGTCCCTTGC TTCCATCCGT AGTCAATACT TCTTTCGGGC TACGTATGAT GATTCATCTC AAGTGCACGC CATCAAAGAA ATCATCAAAC TTTTTGGGTG GAGAGAGGTT GCACCTGTAT ACGTTGACGA CACATTTGGC GAAGGTATAA TGCCTCGTCT TACAGATGCG TTACAAGAGA TTAACGTCCG TATACCTTAT AGGACCGTGA TCTCTCCCAA TGCCACGGAT GATGAAATCT CTGTGGAACT TTTCCGGATG ATGACTCTAC CCACTAGAGT ATTTGTTGTC CACACTGTTG AATTGCTTGC CTCAAGATTT TTTGCGAAAG CAACGGAAAT TGGTTTGATG AAACAAGGAT ATGTCTGGAT CCTCACCAAC GCAATTACCG ATGTTCTAAA TATCATGAAC GAGACGGAAA TTGAAACAAT GCAAGGGGTA TTGGGTGTAA AGACTTATAT CTCGATGGAC GAAGAGATCC CAATTTCTGA CCTGAACGTA TATGGATTGT GGGCATATGA TGCCACCACT GCACTGGCAT TGGCCATGGA AGAAGCTGGG ACATCAAATT TGACCTTTTT CAAGACGGAT GCCATGAGGA ACGTGTCTGA ACTTCAAGGA CTAGGTTTAT CTCAATATGG TCCAAAACTT CTCCAGACAC TCTCTCGAGT TCGGTTCCAA GGTCTTGCTG GTGATTTCCA ATTTATCAAT GCAGAACTAC AGCCATCAGT CTTTGAGATT GTTAATGTGA ATGGGCAAGG AGGAAGGACC ATAGGATTCT GGATGAAAGA GTATGGTCTA TTGAAGAACG TGGACCAAAA ACCAGATACC GAGACCACTT TCTCTTCTTG GCAAGATCGA CTCAGACCAA TTATATGGCC TGGAGACACT ACTTCCGTAC CCAAAGGATG GGAGATCCCG ACAAATGGGA AAAGGCTGCG GATAGAAGTC CCAGTTAAGA ACAGTTTTCA ACAATTTGTA AAGGCTACAA GGGATCCTAT CACCAATTCA ACAATTTTCA GTGGATTCTG CATTGACTAC TTTGAGGCTG TAATTCAAGC GATGCCCTAT GATGTTTCCT ATGACTTCAT TCCTTTCCAA GATGGTGATT ATGATACCTT AGTCTACCAA GTGTATCTTG GGAAATATGA TGCTGTGGTG GCAGATACAA CAATATCGGC AAATAGGTCA ATGTATGTTG ATTTCTCATT GCCATACACA CCATCAGGCG TAGGTCTGGT CGTCCCTGTT AAAGACAGTG TTAGAAGAAG CAGTACCATC TTTTTGATGC CTTTGACTTT GGCACTTTGG CTAATCAGCC TTTTGTCCTT TTTCATTATT GGCCTTGTCG TATGGGTTGT TGAACATAGG GTAAACCCAG ACTTTGGTGG GCCTGGCCAG TATCAAATCA GCACTATCTT CTGGTTTGCT TTCTCCATTA TGGTCTTTGC GCCGAGAGAA AGAGTGCTTA GCTTCTGGGC AAGGCTCGTG GTTATCATTT GGTACTTCTT AGTACTTGTG TTGACTTCGA GTTACACTGC TAGTTTGGCA TCGCTTCTTA CATCACAGCA GCTTCATCCA ACGGTAACCA ACATAAATAG CTTGCTGGCA AAAGGAGAAT CTGTGGGATA TCAAAGAAGT TCCTTCATTT TGGAAAGACT CAGAGACTCA GGTTTCTCAG AGACTAGTCT TGTATCCTAT GGGTCACCAG AAAACTGTGA TGCGCTACTG AGCAAAGGAC CAGCAGAGGG TGGTATTTCT GCGGCTTTCA TGGAAGTACC TTACGTGAGA ACTTTTCTTG GACAATACTG TAACAAGTAT AAACTGGTTC AAACACCGTT CAAGGTCGAT GGATTAGGCT TCGTCTTTCC CATTGGATCC CCTCTAGTGG CTGATATTTC AAGGGCCATT CTGAAAGTGG AAGAGTCAAA CAAGGCAAAC GAACTCGAGA ATGCATGGTT CAAGCCAATA GATGAAAGTT GCCCAGATCC GCTCACTAAC CCTGATCCAA ACCCCTCAGT ATCCTTCCGC CAACTTGGCT TTGATAGTTT TTGGGTTTTA TTTCTTGCTG CCGCCATAGT TTGCGCTATA GCATTGGGTA TATCTGTGTG TCAATTCTTG AAGGAGAACC CAGATCAAAG AAACATGCGA GTATTGTGGG AAAAGTTCAA AACGCCAGAT CAAAAGTCAT ACATAAAAGA GGTGACGAAA TGTCAATGCT CCTCAGGTCA AGGCATGCCA AAGAATGACC AAGAAGGAGC AAACCCAGAA CACCATGACA ATCAAAGTTA GCACTGCACA TCTTTTGTTT TCCTTTCTTC ATTACATCTT TGAAAATCCC AAACAAAAGA GACACTTCCT AGGATCCTGA TGAT 
Length2744
Protein Sequence
Protein Residue
Map Locationscaffold_7: 3963149.. 3966409
Download Sequence
A.thaliana
AGI-codeAT5G27100.1
Descriptionglutamate receptor 2.1
TAIR curator summarymember of Putative ligand-gated ion channel subunit family
Alias[ATGLR2.1][GLR2.1][ARABIDOPSIS THALIANA GLUTAMATE RECEPTOR 2.1][glutamate receptor 2.1]
Gene coexpression
MR
MR Locus Description
12.7279 Ahg922482 LOB domain-containing protein 32
17.0294 Ahg943179
28.0891 Ahg898770
30.4631 Ahg484261 ureide permease 4
35.2987 Ahg359679
36.9865 Ahg933375 low-molecular-weight cysteine-rich 62
40.0625 Ahg942362 receptor like protein 51
41.7133 Ahg333418 low-molecular-weight cysteine-rich 51
48.7134 Ahg926969 receptor like protein 51
53.2729 Ahg493225
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression