Detail



ID : Ahg491727

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|491727|fgenesh2_kg.7__1160__AT4G30240.1
Sequence
AAAAATAAAA ACGGAAAGCT GGAAGAAAAA TAAAAATTCC TTCTTTCCTT CTGAAGCAAA AAAGGAAGAA GAGAAGAGCA GAGAAGGAAG TAGAATCTAA TTTGGATTTT AATCGGAGAG AGAATCTATT CCGACGAATT TTTTGGGTTG ATTTGGATTT TTGTCGATTT TCGTTTAGTC TTAATTTGAG GGGTTTTGGT GTGGTTTCGA AGATGATGGT AGCTAATAGC TTCGATCTAT GGCAAAAAGA TGTTTTTTTC TCTGCAGCTG AGGAGGTTCA AGAATCTGCT GATATAATGG AATCTGCGTA TAGGTTGTGG TTTAAACAGA AGAGAGACGG TCGAGTAACC GTCGAATCAG ACGAGCTCTG CAAAGAACTC CAAGCTGCTT TGAGCACTGC TAAATGGCAG TTGGAAGAGT TTGAGAGGGC AGTGAGGTTG AGCCATGGAA ATTGTCGAGA TGACACTACC TTAACTAGGC ATAAACAGTT TGTTACCGCT ATTGAAAACC AGATTTATCG AGTAGAGTCT TCTCTGCAAG AGGCGTTAAG CGAGAATGGG AAACAACCTT TGCGTTGGGT GGATCTTAAC AAAGAAGAGC GTGATGACCT TGCCATGTTT CTATCTGGAT CTTCTCAGAC ATCAGAGAGT TTAAACAGTG ATAGCATTAA CTTGAGAGAT TCCTCAACGA GTTCTGTAGC TGAGATTCCA CGTGGGATGA ATGGCAGACG AGAGACTAGA TGTTATGGTG ATAGTCCTGA CTGTGTGATA GACATTGACG AGAGAGGAAG TCCTGAAAGT GGTGATGCTA TGATCCGCGT TCAAGATGAT AAAAAAGCCG GTACAAGAAG AACATGGAGT TCACCAAATG TACCGAATAT CAGTGCGTTG AGGATTAATG TTCCTTTTAA TGCAAAAGAA GAAGAGAGAG AGAAGTTCCT GTCACAAATC GAAGACACTC CTAAAGAAAA AGGATCTAAA CCTCTGTTTT GGCTGCAGAG ATGTCGTGAT TATAACCAGC TCTTTGACAG AGTCAAGGTT TATCAAAGAC GATTTCGTGT TCCATTGACC CGCCCGATTA AGCTCATTCT TTCCTTAACG CTGATCTTGT TTCTTCTATT ATTCATCTTG AGAACTTAAA CCGCGGTTTC AGAAACTCTC AAGAAACATT GACAGGTGTT TTCACAGATT CTTGTGTAAT GGGACATGAT TCAACATCCT TAGAGAAGGA AGAGAGATTA GAAGCTTTGT CAAGATTCAA AAGAAGGACA AACTCTGCTT TATTACTCTC TCTTATCCTT AGGGAACATA TAGGAACTTG TATATTTGTA AGATCAATAT GTAAAACTTG AAGCTACGTT TCGTAAAACG TTAGACGTGT ACCTAAAGGA AACCAATGCG TGTTTGTGTT CAATGATATC TCCAGTGTTT GTTTGTCTCT CAGATATTT 
Length1449
Protein Sequence
Protein Residue
Map Locationscaffold_7: 4560562.. 4562617
Download Sequence
A.thaliana
AGI-codeAT4G30240.1
DescriptionSyntaxin/t-SNARE family protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
28.3373 Ahg495173 Clp ATPase
30.249 Ahg472467 phytochrome-associated protein phosphatase type 2C
30.5778 Ahg492259 conserved peptide upstream open reading frame 12
37.2022 Ahg473661 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein
43.8178 Ahg323917 RHOMBOID-like protein 4
50.6162 Ahg487925 transducin family protein / WD-40 repeat family protein
50.8232 Ahg933420 glutathione S-transferase tau 4
59.1439 Ahg950854 exocyst subunit exo70 family protein E2
60.4649 Ahg913087 PLATZ transcription factor family protein
61.2372 Ahg907482 Actin-binding FH2 (formin homology 2) family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression