Detail


ID : Ahg491780

Blast(Query):  A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|491780|fgenesh2_kg.7__1213__AT4G29800.1
Sequence
ATGAATCGGC GCTACGATAA ACCGCCGCCA TTGTCAGTTT CCTCCAAGGG GAAGAAGAAG CATTTTGTCA ATCACACAGC TCCCAACACT CCTGGAAATT ACGAGAGGAC TCAAACCAGT CCAACGTTAT CAACGACTCG ATCTCACGAA CCCGATGATA AGCTCAATTA CGAGATCTTC TCGATTCTCG AAAGCAAATT TCTCTTCGGT TACGAAGACC CAAGGCTACT ATGGATTCCT CGGAGTCCAT TACGACCCGG TGATTCCGAA GCAGGTCCTT CTCCGAGATC TCCGTTGACT CCAAACGGCG TCGTTCTCCC AGGAACACCG TCTTCATCGT TTAGAAGTCC AAGAGGAAGA ATCTGTGTTT TGAGCATTGA CGGTGGCGGA ATGAGAGGTC TTTTGGCGGG AAAATCCCTA ATCTATCTTG AGCAGATGCT GAAAGAGAAA TCCGGCGATC CAAACGCTCG AATCGCAGAT TACTTCGACG TCGCTGCCGG ATCAGGAGTC GGCGGAGTCT TCGCGGCGAT GATATTCGCG ACTAGAGACG GTAACCGCCC GATTTTCAAA GCCGAAGACA CTTGGAAATT CCTCGTCGAA AACGCCGAGG GATTCTACAG ATCAGGCGGC GGAAGTGGAG GAGGAGGAGC AGGAGCAGCG ATAAAACGGG TCATAAGATC TGGATCCGGA TCCGGATCAT CTTCAGTAAC CGCCGCAACG GCAAAGCTAG AAAAAGCAAT GAAAGCATCA TTCGCCGATC TAACGCTTAA AGACACACTC AAACCAATCC TCATCTCTTG CTACGATCTC TCAAGTACGG CGCCGTTTCT ATTCTCACGC GCCGACGCGT TAGAAAGCGA CAGTTTCGAT TTCCGTCTCC GAGATATTTG CCGCGCCACG TGGGCAGAGC CGGGGACGTT TGATCCGGTT CGCACGTGTT CCGTTGACGG GAAAACGCGG TGCGTTGCGG TGGGAGGTGG ATTAGCGATG AGTAATCCGA CGGCGGCGGC GATAACGCAC GTGTTTCATA ACAAACAGGA GTTTCCGGCG GTGAAAGGAG TGGAGGATTT GTTGGTGTTG TCGCTTGGAA CTGGTCAGCT TTTTGAAGTG AATTATGATT ATGAGCAGGT TAAGAATTGG CGGGTTAAAG AATGGGCTCG GCCCATGGCG AGGATCTCTG GTGATGGATC TGCTGAGTTT GTTGATCAGG CTGTTGCTAT GGGCTTTGGG CCTTATCGGA GTAGTAATTA CGTTCGCATT CAGGCAAATG GATCGCGATT AGGAGCATGT GGACCGAACG TGGACACAGA TCCAAGAGCA GAGAATGTGA AGAAACTGAC GGAGATCGCT GATGAGATGT TGAAGCAAAA CAATGTGGAA TCGGTTTTGT TCGGAAGCAA AAGGATCGGA GAAATGAGTA ATTCAGAGAA ACTAGAGTGG TTCGCGAGTG AGCTGGTCAT TGAGCAGCAG CGACGAAGTG TCAGAGCGTC TCCAACCGTA ACGCTAAAGC AAGCTGTGTC CAAAACCAAC CGCAACGCTA TAAACGCTAC TCTCACTCTC ATATCTAAAG AAAGATGAAA ACATCTTTTT TTAGTGCTTC CTATTGGT
Length1608
Protein Sequence
Protein Residue
Map Locationscaffold_7: 4789431.. 4791184
Download Sequence
A.thaliana
AGI-codeAT4G29800.2
DescriptionPATATIN-like protein 8
TAIR curator summary
Alias[PLA IVD][PLP8][PATATIN-like protein 8]
Gene coexpression
MR
MR Locus Description
2 Ahg947468 Protein with RING/U-box and TRAF-like domains
16.1555 Ahg935693
20.1494 Ahg491996 HSP20-like chaperones superfamily protein
24.1661 Ahg929996
24.1868 Ahg942261
25.1992 Ahg359447 Cyclopropane-fatty-acyl-phospholipid synthase
30.7409 Ahg947871 SNF1-related protein kinase 1.3
37.4166 Ahg943772 R-protein L3 B
43.2666 Ahg318430 F-box and associated interaction domains-containing protein
52 Ahg929977
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression