Detail



ID : Ahg947871

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|947871|scaffold_704100.1
Sequence
GATTTTCTAC CTATAGTAAA ATGGAGGGAT CATCGAGAAA GACTACTAGT AGAAAGAAAT CAGTTCTACC AAACTATATG ATTGGTAAAA CACTTGGGCA TGGATCATTT GCAAAAGTGA AATTAGCGGT GCATGTAGCT ACTGGGCACA ACGTTGCTAT CAAAATCTTT GATCGTCTTA AGATTAAGAA AATGGACGTA GACATCAAAG TGCAAAGGGA GATCAAAATT CTTAGACTGT TGATGCATCC TCATATCATC CGTCAGTACG AAGGTATAGA GACGCCTGAT AACATTTATG TTGTGATGGA ATATGTTAAG TCTAGAGAAT TATTTGACTA TATTGTAAGA AACGGTAGAT TACAAGAAGA CAAGGCTCGT CATCTTTTTC AACAGCTCAT ATCTGGTGTG GAGTATTGTC ATCACAATAG AATCGTTCAT AGAGATCTTA AGCCAGAGAA TGTACTTTTG GATTCAAAAT GCAACATAAA AATTGTTGAC TTTGGATTGG GTAATGTCAT GCAAGATGGT CACTTCTTTA AAACAAGTTG TGGAAGCCCT AATTATGCTG CTCCCGAGGT TGTTTCAGGA AAACATTATT CTGGACCAGA AGTAGATATA TGGAGTTGCG GAGTGATATT GTATGCTCTC TTATGTGGTA CTCTTCCTTT CAGCGACGAA AATATACCTA GTCTATTCGA TAAAATAAAG AGAGGAATAT ATATTCTTCC AGATCATTTA TCACCTCTTG CTAGAGATTT GATACCAAGG ATACTAATGG TGGATCCTCT AATGAGAATT AGCATTGCTG AGATTCGTCA TCATCTTTGG TTCAATAATG ATCTTCCTCC TTATCTTACT ATTCATCCAT TAGATACTAT AGAACAAGCT AAAAAGGCTA CCGTTGCATA CCATCTACTA CTGAACGACC AGAATCGAAA GTGTGTTCCT AATGACCATT CTCACTCCAA GTTTAAAGAG ATATCGGATG GTGTTCATAT GAGATCTCAT TCACCCCCAA AAGATGGTAT ATTTAATTCG ATACTTCCAA TTGATCAAGA GATTGCTTCA AATGTTGGAC ATTCGTTTCC TGCATTGACT GGACTAAGAT CACAATTCCA AGATAATAGA AGTTGGACCC TTGGACTTCA GTCTCAAGGG AGTCCTCGTG AAATCATGAG TGAGGTTTTT AAGGCTCTTC AAAGTCTAAA AATATGCTGG AAAAAGATTG GACTCTACAA TATAAAATGC AAATGGGTTC GAAGCTTTGC AAACTACAAG AATCAAAATC AAAAGGATAA TGTCCTCAAA GATGAATCTA ACATGATTGA GGATGAATGT TCTATGGTCT TACCAACTGT CATCAAATTT GAACTTCAGG GCAAGTACTT GCTGGACATC CAGAGAGTTG ATGGACATCA GTTTATCTTC TTAGATCTAT GTGCTGATTT TCTCACAGAG CTAGGTGTGC TCTAATGCTC AATCATCAAT GTTTTT 
Length1496
Protein Sequence
Protein Residue
Map Locationscaffold_7: 21761463.. 21765098
Download Sequence
A.thaliana
AGI-codeAT5G39440.1
DescriptionSNF1-related protein kinase 1.3
TAIR curator summary
Alias[SnRK1.3][SNF1-related protein kinase 1.3]
Gene coexpression
MR
MR Locus Description
3.4641 Ahg483478 Carbohydrate-binding X8 domain superfamily protein
8.66025 Ahg903806 Protein of unknown function (DUF59)
9.48683 Ahg909593 NAC (No Apical Meristem) domain transcriptional regulator superfamily protein
11.4891 Ahg905965
19.7737 Ahg326314 Cysteine-rich protein
20.445 Ahg338398 Cullin family protein
20.9284 Ahg947386
21.2132 Ahg472315 F-box family protein
21.7025 Ahg901700
22.2261 Ahg914559 nodulin MtN21 /EamA-like transporter family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression