Detail



ID : Ahg492269

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|492269|fgenesh2_kg.7__1702__AT4G25580.1
Sequence
GTTCGGCTAT GCGTCTTCCT CCTCTTTCTC TACTCTTTAA CTCTGTATAA AGCTTTCAAG AAGCTCCTCG GATTTACTCA GAACAATTTG ATTGCAGAGA AAGGAAAAGA GCAAAACCAA AGTTAGCAAA TATTATGGAT TCGCAAGCGC AGTTGCAACG TCCTCATGGT CATCACCAAG CAGAGGAACC AATTAGGATT CACCATCCAG AGGAAGAAGG GCATCATGAG AAAGGACCAT CAAAAGTTCT GAAGAAAGTG AAGGAAAAAG CAAAGAAGAT CAAGAACGTT CTTACTAAAC ATGGACATGG TCATGAGCAC GGTCGTGGAG AACACATCCC CGATGATCAC GATCTCGACC AAGAAGACGA TGAAGATGAC TACCAAGGCC AACAACTCCA CGGGGGTGCA CCAGCACGAG GAAAAGCTCA CAATCCGGTG AAGGAAGAAA TAGTCCCTCC AGGCACGAAA GCATTTCCGG TTGTGTCTTC TTCACATACG AAACACTCTG AGCCAATCAG AGGAGTTGGC CAGGAAGCAG TTTCTCATCC TGTTAGACCC TCCGGTGTTC CTGATAAAGA AGAAAGAAGA GGGGCTGCTA CATTGACACC ACATAACACC CCCGTGTCAT TACTCTCTGC GACCGAAGAT GTCACGAGAA CATTTGTTCC TGGTGAAGAC AAGTCTAGAG ACCAACGTAA GGTCAATATG GAGAGACCCA GAGGATTGGA GCAAGATCCA GCTGCTCCGG GATCTCATGG TCAGGTGTCA AATGACCAGT CCAAAGTTAC TGATCCCATC GGAAAATCTA CTGGAAAAAT TGGAGCAGCA ACGACTGTCT CAGCTCTTGG AAGATTAGGT GGCCTTGACA CGAAATCGGC TGCTCCGGGA TCTCATGTTG GAATGTCTAA TTATCAGTCC AAAGTTACTG ATCACGCTGG AAAAGAAATT GGAGAACAAC CACGTGTCGC AGCTTTTGGG AGGGGGGAGA AAAGTCGTGG TTTTGATACT AAATCAAGAC CTGAAATGGG CAAGCACTTA CCGGCGGGAG ACTATGGATC TAGTTTGGGA AAAGAATCTC CGGAGAGGAG TCAAGAATTT GATTTGGGAA AAGATTTGCT AACGAGAACT CAAGGTATAC AAAAGCCTGC TGGTTTTGAT TCGAAAGGTC AGGAGAGAGG AGATGAAATG CAGCAGCCGA ATCAGAGCAG CTACACTGAT AAGATCGCAT TAGCGACTTC GGTCGTAGCT GACAAAGCTG TGGCAGCGAA GAACGCCGTC GCTTCGAAGC TCGGTTACTC TGGGGAAGCC GGCCACGAGA ATCGTGTAGA AGGAGCAGAA ACTCCTAGCT CCGCTGGTGG ATACGGGAGT ACGGTCGCAG GTATGGTGAC TCCAGTTTAT GAGAAGGTTA AAGAAACAGG AGCTAGTGTA ATGACGAAAT TGCCATTCTC CGGGACAGGG ACAGAGCAAG GACAAGACAA GGGCGTCTCT GCTAAAGAAT ATCTTACGGA GAAACTGAGT CCGGGAGAGG AAGACAAGGC TTTGTCGGAA GTGGTCGCTG AGAAGCTTCA TCTTGGAGGA GGCGGTGGCG AGCCGAAGAA GGGGATAGTG ACACAATCGG AGGAGGTGGA GAAAAGGCTA GGACGGTTTA AGGATCCGAG CTCGGAAGCA GCTACAAAAC ACGGTGAAGA GTATGCGGAG GAAGGCGAAG GAGGGATGGC GGAGAAGCTG AGAGGAGCTG TTACTTCGTG GCTTGCTGGT ACGACGGAAG AAGTAACGCA AAAGTCTACA GAATCTGTTC AAGACTCTAC ACAGTCACTT GGCTCCACCG TTGGGAATAA AATGGGAATT TCTGGTTCGG GAGGAGATGA AGCAGGCAAT GGTGGTTCTG TGCCTTTGCA GAGGAGATTT CAAGAATCTG GAAAGTGAGC TTTGCTTCTT CTTTTTAATG TGTTTTGTGG TTTGATCCAT GGCTTATTTT GATGTATCTC TATCTACTAG TGCCATGTAA AA 
Length2012
Protein Sequence
Protein Residue
Map Locationscaffold_7: 6575026.. 6577559
Download Sequence
A.thaliana
AGI-codeAT4G25580.1
DescriptionCAP160 protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
34.8138 Ahg932542 RNI-like superfamily protein
37.2022 Ahg327156 glycosyl hydrolase 9B14
38.2361 Ahg937168
49.1427 Ahg474772 proline-rich protein 1
49.1732 Ahg477911 NOD26-like intrinsic protein 7;1
53.3854 Ahg936781
67.7052 Ahg350386 Subtilase family protein
68.9638 Ahg937043 Polynucleotidyl transferase, ribonuclease H-like superfamily protein
74.5654 Ahg947612
75.2529 Ahg321514 proton-dependent oligopeptide transport (POT) family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression