Detail



ID : Ahg492806

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|492806|fgenesh2_kg.7__2239__AT4G20800.1
Sequence
ATTCAATCAA AGTAATGAAA GAAGTAGTTT ATGTTCTGCT ACTTGTTCTT CTTGTTTCGG TTTCAGATGC AAATGAAACG AAACCAAATA CTGAAAACTT CCTCCGATGC CTTCGTAATC GGACCAGTCC GAAGAATCCG ATCACTGAAG CCCTCTATAC TCATGAGAAC TCCACCTTCG TGTCATCTTA CGTGTCCTAC ACGAAAAATA AACGGTACTC AAACCCTAAC GACACAAAAC TAATCGCCAT TGTTGCTGCA AAACATGAAT CTCATGTTCA GGCAACCGTG GTCTGCGCAA AGGTCAATGG AGTCCAGATC CGTATCCGAA GCGGCGGTCA CGACTATGAG GGACTTTCAT ATATCTCCTC TGTTCCGTTT GTTATTCTCG ACATGCACGA TCTCCGGTCT ATAACCATTG ACGTGTTCAG AAAGCAAGCT TGGGTTGATG CAGGTGCGAC CATGGGAGAG CTCTACACCA AAATCGCAGA GGCTAGCAAA ACGCTAGCGT TTGCGGGTGG CGTTTGTCCT ACATTAGGGG CGGGAGGACA CATCAGCGGC GGAGGATACG GAAATTTGAT TAGAAAGTAC GGAATTTCAG TCGATCATGT CGTTGATGCT CGAATAGTTG ATGTCAACGG CAATATCTTG ACAGGAGCTA CCTTGGGACG TGATCTATTG TGGGCTATTC GAGGCGGTGG GGGCGCAAGC TTCGGAGTTA TCCTTTCCTG GAAAATCAAC CTCGTCGATG TTCCAAAGAC CGTGACAGTT TTTAAGGTTA ATAAAACATT GGAACAAGGA GTTACTGATG TTCTCTACAA ATGGCAGCTT GTCTCTAGCA AATTGCCTCG AGACCTTTTC TTGAGAGCAA TGCCTCAAGT CATAAATGGC GCGGTACCTA GCGAGAAAAC CATCGCGGCT GTGTTCTACG CTCAGTTTTT AGGCTCAGCA AGGAGGCTCA TGGCGATTAT GAACAAGAAT TTGCCTGAAT TAGGGCTAAA ACGTGAAGAT TGCTACGAAA TGAGCTGGAT TAATACGACA ATGTTTTGGC AGAACTATCC TGTGGGAACA TCGACAAGCC TTCTATTGGC TAGACCATCG GATCCGCCAG GAGCATTCTT CAAGAGTAAA TCGGATTACG TCAAGAAACC AATCCCAAAA GAAGGAATGG AGAAGATCTG GAAAACAATG TTGAAGTTCA ACAATATGTG GATGCAATGG AACCCTTACG GCGGAGTGAT GGACAAGATT CCGGCTGATG CCACGGCTTT TCCTCATCGA AAAGGAAACT TGTTCAAGAT TCAGTACTTT GCGTTATGGA CAGACGCAAA CGCCACAGAC GCTAATCTCG GTCTGATGAA AGAGATTTAC GATGAGATGG AGCCGTACGT GTCAAGCAAC CCGAGAGAGG CGTTCTTGAA TTACAGAGAT ATCGATGTCG GAAGCAATAT TAGTGGTAAA ACCAATGTTG AAGAAGCTGC AGAGATCTAT GGATCCAGGT ATTTCTTGGG GAACTTTAAG AGATTGATGG AAGTTAAAGC TAAGTATGAC CCTCAGGATT TCTTTAGATT CGAACAGAGT ATTCCTCCTG TTCGTGCAAT GTAACTCTTG CATTTAACCA AAAAAA 
Length1626
Protein Sequence
Protein Residue
Map Locationscaffold_7: 8972701.. 8974291
Download Sequence
A.thaliana
AGI-codeAT4G20800.1
DescriptionFAD-binding Berberine family protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
8.18535 Ahg351806 Galactose oxidase/kelch repeat superfamily protein
13.6382 Ahg490172 Ubiquitin-like superfamily protein
18.2209 Ahg933779 Domain of unknown function (DUF313)
20.4939 Ahg478122 Pectin lyase-like superfamily protein
25.807 Ahg316691 Glycosyl hydrolase superfamily protein
26.3059 Ahg475725 Subtilase family protein
31.0805 Ahg485009
36.7423 Ahg917658 subtilase 4.13
38.6523 Ahg925080
45.2106 Ahg944327 zinc finger (C2H2 type) family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression