Detail



ID : Ahg492840

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|492840|fgenesh2_kg.7__2273__AT4G20310.1
Sequence
ATGGAAATTT CCGGACGGCG AGTGAGAAGA TTCCGAAGAG ATCGCCTCGC CGGCGGCGAT AACATTGAAA GCGAAGCCTC ATGCTGCTAC TGCGATTTCA AAATCTCGAA TTTCAACGAA CCCATCTTCC GTCTCGGACG ACGATTCTCC GGAGTGATGA AAGTCTGGTT CTCAATCGGA CTCGGATTCG GCGTCGCTTC TCTAATCCTC GTCACCGTCT TCCTGCTCCT TCAGTTTCAT CCAAACCCAT TATTCTCCAA TCGTCTCTCT TCCGCCGTAT TTGGATTCTC TCCTTCCACG CGTGTATCAT TATCCGGCAT TGCCTATGTG TTAGTTTCCA CTGTCATTAC TGTTTCAGTT CATGAACTTG GTCATGCTCT TGCTGCTGCT AGTGAAGGAA TACAGATGGA ATACATTGCC GTTTTCATTG CAGCTATATT TCCGGGAGGT CTCGTAGCTT TTGATAATGA TGTCTTGCAA TCACTTCCAA GCTTTAATGC TCTTCGTATT TACTCTGCCG GTATTTGGCA TAATGCTGTG TTATGTGCAC TCTGCGTGTT CGCGTTGTTT TTATTGCCTG TTATGTTTTC TCCGTTCTAC AAACACGGTG AAAGCCTCAC GGTTGTGGAT GTGCCTTCTA TGTCGCCATT GTTTGGTTAC TTGTCTCCTG GAGATGTTAT TGTGTCGTTG GATGGCATAC AAGTCCATAA ACCTAGTGAA TGGCTTGAAC TGGCAGCGAT TTTGGATAAG GAAAACAGTG AAAAATCAAA TGCTTCCTTG TATCTTGGAG GTTCAAGGAG ATTTCATCAC GGGAAGGGTT ACTGTGTCCC TATCTCTCTG ATTGAAGAAG GGTTGAAAGG AAATATGGTT GAGAACCAAT TTGTTTGTCC CGGTGATCTC ACTGCATTTC GAACAATGCC ATGCTCAAAT GCAGCCCTGA GAGAGGTTTC TGTTTGTTTG GATGCAAAGG ATATCGTCAA GCTTAGCAAA TGTGGTGATG GATGGGTGAC AACATCAGAC ACCGATAGCA AAAGTGACTG CGTATGTCCA CAGCAATGCA ATCTCCAGGC GTATCATGGA CAGAGATCAC CTATAAAAAA AACTCATCAC AGAATTGTTC TAGACTTGGT CTCGATTTTA ATACCTCAAA TTGTCTTGGC ACGTTTGTTT TTGTTGGTGA TTTGATTGCC ATGTCACATT CAGTTCATTT AACCGCATAC CAACCTCGTT GGCTATTTAA CTTCTTTGGA AAGTCCTTCC CGGATATTCT AGAAAGAAGC TTGACCTGCA CATTCCATGT CTCTCTTGCG CTAGTTCTTC TGAACAGCTT ACCGGTGTAT TACCTTGATG GTGAATCAAT TTTAGAGTCC AGTCTCCAGT CTTTTACTTG GTTAAGCCCA AGAAAGAAGA AAAAAGCTCT TCAAGTATGT CTTGTTGGAG GCAGCCTCCT CTCTTTCCTC GCCTTCTTCA GAATCTTCCT CGTCGGTTTA CCTCTGAGCC ACCGATGGTA AATGCCCGAG 
Length1520
Protein Sequence
Protein Residue
Map Locationscaffold_7: 9066187.. 9068265
Download Sequence
A.thaliana
AGI-codeAT4G20310.2
DescriptionPeptidase M50 family protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
19.7737 Ahg485599 sucrose-6F-phosphate phosphohydrolase 2
31.305 Ahg487234 Protein of unknown function DUF455
36.3318 Ahg324227 N-acetylglucosaminyl transferase component family protein / Gpi1 family protein
45.8258 Ahg489049 replication factor C1
48.4045 Ahg941868 HMG-box (high mobility group) DNA-binding family protein
50.3289 Ahg489733 OSBP(oxysterol binding protein)-related protein 1C
62.1289 Ahg496743 ENTH/VHS family protein
68.2788 Ahg497291 Rab5-interacting family protein
68.2788 Ahg481820 Rab5-interacting family protein
68.6586 Ahg477504 Plant stearoyl-acyl-carrier-protein desaturase family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression