Detail



ID : Ahg492959

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|492959|fgenesh2_kg.7__2392__AT4G19000.1
Sequence
ATGCAAGAGT TAGATGATTC TAACGATGAC TGGGTGAAAG AACTTGAAGA AGTTCTCGAG GATAACGAGG AATCGAAATT CACAGGGAGG AGATTAGTTA AAAAGTCGAT TTCTGTTCCT GAATTGGTAG ATGAAGTTGA CGAAGATCTT AACGATTTTA TGGAGCCTGA GGATGATTTT AATGACAAAG TAGGGAAGAA GAGACAGAGG AAGAAAGATG AGTCTGTTCT TGAGAAGACG AAGAAGAAGA AGCAAAATTC CGCAGAGGTT CAAGAGATGT GGGATTCAAT TACGAACGAC AACAACTCCC AGGATGGTGA TAAAGTCGTA GTAAAACGTC CTAAGAAAAA AGATGAGGAT GCTGAGGAGA TAGCCAAACT GTTCAGTCTT AGGAAAAAGA AGTGCAAGAG CAAGAGCGAT AAAAACGCAA TGGAGATTGC GATGCAAGTA GAACAAGTGA TGGCGAATCT TGAAATCGCT GTAGAAGACG ACGTAATTCT AAACAGAGAA GGAAAACCCG CTATTAATAA GCTCATGAAG TTACCTCTTC TCAATGAAAC TCTCTCAAAG AAACCTCTTC AAGCTGAGTT CTTAGATCAT GGAGTACTTA ACCTTCTCAA GAATTGGCTC GAGCCGCTTC CTGATGGTAG CTTACCAAAT ATAAACATCC GCACTGCCGT TTTGATGATT CTTAACGATT TTCGTATCGA TCTAGATCAA GACTCTAGAA GAGAACAGTT GATCAAGAGC GGTCTCGGGA AGGTCATAAT GTTCTTATCA AAATCAGATG AAGAAACCAC ACCTAATAGG AGACTCGCTA ATGATTTAAT CAACAAATGG GGCCGTATCA TTTATAATAA GAGCACAAGA TATGATAAGA TGTTTAGTCA GGAGGAACTT GAAGAGCAAC GGCAAATGCT ATTAAGAAGA CAGATCAAGA CAGCTCCTAA GGTGTCTGAA ACAAAAGCTC GAAACTTTGA TACAGATCTT GACCTTTATG TGCTAGGACC TTGGACAGGA AGAGCAAGAG CGAAAATACC AACAGCATTA TCGATGGACT TTAGGATCCG TCCTCCACCG AAGGTTGACA AAGAACCTGA AGCTTGTGCC AAGTGGGAAA TGGACAAAAG ACATAAAAAC AAGCAGCGAA AGATCATCAG GAAAAAGGGC ATGCAAGCAT TCAAGCTTAG TGTAGACGGA CGCACTATGC TCAAGTACTT GTAG 
Length1224
Protein Sequence
Protein Residue
Map Locationscaffold_7: 9781406.. 9783307
Download Sequence
A.thaliana
AGI-codeAT4G19000.1
DescriptionTranscription elongation factor (TFIIS) family protein
TAIR curator summaryThe C-terminal portion of this protein has homology to the C-termini of the IWS1 (Interacts With Spt6) proteins found in yeast and humans.
Alias[ATIWS2][IWS2][ARABIDOPSIS THALIANA IWS2 (FROM YEAST INTERACTS WITH SPT6)]
Gene coexpression
MR
MR Locus Description
39.7995 Ahg924774 SLAC1 homologue 1
44.4972 Ahg479358 MUTS homolog 2
47.676 Ahg928069 DHHC-type zinc finger family protein
70.7107 Ahg936745
91.3345 Ahg930390 isopentenyltransferase 7
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression