Detail



ID : Ahg493178

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|493178|fgenesh2_kg.7__2611__AT4G16990.2
Sequence
TTTCCATGAA GTCTTCTTCT TCTTCTTCAT CTTCTCGTTG CTGGAGATAC GATGTTTTCC CAAACTTCAG AGGGGAAGAT GTCCGCCAAT CATTAATCAG CCATCTTCGT AAGGAACTTG ATGGCAAATT AGTCAATACA TTCAACGACA CCAGGATCGA AAGAAGCCGC AAAATAAACC CAGAGCTTTT ATTGGCGATA GAAGGGTCTA GGATCTCACT TGTCGTCTTC TCTAAGAACT ATGCTTCTTC CACGTGGTGC TAAGATGAAT TGGTGAAGAT CCAAGAGTGC CATGAGCAGT TGGATCAAAT GGTGATTCCT ATTTTCTACA ACGTAGATCC TTCTCATGTT AGAAAACAGA CCGGAGAGTT TGGTAAGGTC TTTGTAGAGA CCTGCAAGGG CAGAACAGAG AATGAGAAGC GAAAATGGAT GCGAGCTCTA ACAGAGGTAG CAAATCTAGC CGGTGAAGAT CTTCGGAATT GGCGTAGCGA AGCAGAAATG CTTGAAAACA TTGCCAAAGA TGTTTTAAAC AAACTTATTA CCCCATCAGA TAATTTCAGT GACTTCGTCG GGATTGGAGC TCATATAGAG ACATTGATAT CAATGTTGCG CTTCGACTCA GAGAAAGCGC GAATGATAGG GATTTGTGGG CCTTCCGAAA CTGGTAAGAC TACCATAGGA AGAGCTCTAT ACAGCAAAAT CAAAAGCCAC TTCCACCATC GGGCTTTCGT AGCATACAAG AGAACAATGC CGAGCGATTA TGACCAGAAG TTGTATTGGG AAGAACAATT TCTATCAGAA ATTCTTTGTC AAAAGGATAT AAAGATAGAG GAATGTGGTG TGGTGGAACA ACGACTAAAG CACAAGAAAG TTCTTATTGT TCTTGATGAT GTCGATGATA TTGAGCTACT ACAAACGTTG GTAGGACGAA TCAGATGGTT TGGATCTGAG AGCAAAATTG TTGTGATTAC TAAAAAAAGG GAACTTCTCA AAGCTCACAA GATTGCACAT GTTTATGAAG TGGAATTCCC ATCAGAAGAA ATGGCTCATC AAATGTTTTG TCGATATGCT TTTGGGAAAA ACTCCCCACC TCATGGTTTC AGCGAGCTTG CATTTGAAGC TGCAAAGCTT GCCGGTAATC GTCCTAAAGC TCTGAAGCAC TTTGGCTCGT CTTTTAGAAG GATATTGGAT AAGGAAGAGT GGGTGAAGAT TCTATCGGTA CTCTGTAATG AGAATAAACT AAAAATCAGC TATGATGGGT TAGATGGCAA AGGTCAAGGT TACATTGCGT GTTTAACCAA TGTGAAGGCA GAGTGGATCC ACTTGGCACT AGGCGTGTCT ATATTACTTA ATATCCGCAG TGACGGAACG ACATTTCTCA AACATTTGAG CTACAATCGA AGCGTGGCGC AACAAGCAAA AATATGGTGG TACGAGAATT GTGAAAGAGT GTACAAGAAG TACAATATAT GTGGCATAGA TAGCTCAATT CATGGTGGTG GTAAGAAAGT TTGTGACGGT GAGTTAGACG GCAAAGATCA AGGTTCAACG TATGGACAAA GTTCAAATTC TGAGCTTCAA ATAAACATGG ACGCAAGCAA TAGGAGATAT GAACCTGTGA GTGAGACGCT TTTCAAAAAT TACGATGCGT ATTTGCCGAA TGGTTTAACG GATGGAAACT GTTCAAATAC CCAGCCTCAA AGAAAATTGG ACGCAAGCCT AAAGAAAGAC AAAATTGTGC ATGAGTGGAT TCGAACCGGT AGTGGCTTCT CTTTTGATTT TCAGGGCCCA AATTCTATAG TGAGTGCTGC TCAATTGGAG GAGAAAAAGA TCGAGTGTGG AGAAGGCGTG TATATAACAC TTGGCAGGCT CAGTGGCGGA ATTATAGTTC TCAAACATTT GGAGTTCAGC CGAAGAGTGG CGCAACAAGC AAAAGTTTGG TGGTCGGAAA ATTGGATAAA AGTGTACGAG GAGCACAACA TCTGTGGCAT AGATAAATCA TTTGATGGTA GGTTTGATGA TAGACGTGTC ATTTGTCAAT TAAGACCAAA CTGAAGCCCG GCCTGGTCCT TAAAATAGTC AGGACTTGAG CTATATACTT AAGCCTAAAA GCTTGTCTGC CCTAAGTCTG GTCAGGTTAG CCCGAAATTG TCGAAATCTG TTTAATAATT GCATTTAGTG CAAGTCTTTT ATTTGTACTT CATGGCTTTA ATACATTAA 
Length2219
Protein Sequence
Protein Residue
Map Locationscaffold_7: 10946769.. 10951818
Download Sequence
A.thaliana
AGI-codeAT4G16990.2
Descriptiondisease resistance protein (TIR-NBS class), putative
TAIR curator summary
Alias[RLM3][RESISTANCE TO LEPTOSPHAERIA MACULANS 3]
Gene coexpression
MR
MR Locus Description
8.7178 Ahg906790 RNA-binding (RRM/RBD/RNP motifs) family protein
9.38083 Ahg338119 Disease resistance protein (CC-NBS-LRR class) family
12.3288 Ahg894148
13.8564 Ahg338250 LRR and NB-ARC domains-containing disease resistance protein
20.8567 Ahg941727
25.8844 Ahg893705 disease resistance protein (TIR-NBS-LRR class)
27.6586 Ahg946614 inositol transporter 4
28.3549 Ahg484750 Methylenetetrahydrofolate reductase family protein
28.7054 Ahg315184 cyclic nucleotide-gated channel 12
34.0734 Ahg922228
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression