Detail



ID : Ahg493435

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|493435|fgenesh2_kg.7__2868__AT4G14700.1
Sequence
AAGAAGAAGA AGAAGAAGAA GATAGCTGAG GAAGCTTCGT TCTCTCCTAC ATCCCCAAAT CGATCTGAGA CGATAACGAA GAAGAAGAAC AGAGTTTATT ACAATAAAGT TGAATTCAAT GTAACCGAAT TTGAAATTGG TGATCATGTT TACGTTAAGA GAAGAGAAGA CACGAATTCA GATGAAGAAG AAGAAGATCC AGAGATCGAA GATTGTCAGA TGTGTTTCAA ATCAGATACT AACATAATGA TTGAATGTGA TGATTGTTTA GGCGGGTTTC ATTTGAATTG CTTGAAACCG CCATTGAAAG ATGTTCCCAA AGGTGATTGG ATCTGTCAAT TCTGTGTAGT TCATAAGCCA CCACAACCAC AAGGGAAGAA GAAAGCGGCG AGAACGATGA GGGAGAAGCT TCTTTTCGGT GATTTATGGG CGGCTCGAAT CGAGAAAGCT CGTTGGTATA TGATACCTGA AGAGACGGTT TCGGGGAGAC AACGGCATAA TCTGAAACGC GAGCTTTATT TGACGAATGA TTTTGCTGAT ATAGAGATGG AATGTCTTCT TAGGCATTGT TATGTCAAGT GTCCTATGGA GTTTTCGAAA GCGAGTAATG ATGGTGATGA TGTGTTTTTA TGTGAGTATG AATATGATGT GCATTGGCCA TATGATCAAG AATGGAATGG TGGTAAAGAG GAGGAGATTG ATGATAGTGA TGATGAGGAA GAAAGTGTTT GTGCAGATTC AAAGAGTAAG AGAGGTTTAA CGTGTGCGAA TGTTCGTAAA GGGCGTATCT TTGGGCTTGA AAAGGTGGGA ACTAAGCGGA TTCCGGAACA TGTGAGATTT CATAAGAAGA ATGAGTTAGA AAAAGCGAAA GCTACTTTGT TGTTGGCTAC AAGTCCTAAG TCTCTTCCTT GTAGAAGCAA AGAAATGGAA GAGATCACCG CATTTATAAA GGGTTCAATC TTGGATGATC AGTGTTTAGG AAGATGTATG TATATTCATG GTGTTCCCGG GACTGGGAAG ACTATTACTG TGCTATCTGT TATGAAGAAT CTAAAGGCTG AGGTTGAAGC GGGAAGCGTA AGCCCTTATT GCTTTGTGGA GATCAATGGT CTCAAATTGG CTTCACCTGA GAACATTTAC AGTTTTATCT ATGAAGCGCT GAGTGGTCAT CGCGTTGGTT GGAAGAAAGC TCTACAGTCT CTGAATGAGA GGTTTGCAGA AGGAAAAAGG ATTGGTAAAG AGAATGAAAA GCCTTGTATA CTTCTCATCG ACGAACTTGA TCTTCTAGTC ACTAGAAATC AGTCTGTTTT ATACAATATT TTGGATTGGC CTACCAAGCC TAACTCCAGA TTGGTTGTGT TGGGAATAGC AAACACTATG GATCTTCCAG AGAAGGTGCT TCCTCGGATT TCAAGCCAAA TGGGTATACA GAGACTGTGT TTTGGTCCTT ATAACCACAT GCAGCTACAA GAAATCATTT CTACAAGATT GAAAGGAATC AATGCTTTTG AGAAGACAGC TATTGAATTT GCTTCGAGAA AGGTAGCTGC GGTTTCAGGA GATGCAAGAC GTGCGCTTGA GATATGCAGG CGTGCAGCAG AAGTAGCGGA GTACCGTCTA AAGAAGACTA ACAAAACTGC AAAGAGTCAG CTGGTGATTA TGGCAGATGT TGAAGTAGCC ATTCAAGAGA TGTTTCAGGC ACCGCATATT CAAGTTATGA AGACTTTTTA CAAAACAGGA ATGGCAGAGA CAACTTTTGA CAGAGTGGCA ACAACAGTAT CGTCTCTTTG CTTAACCAAT GGAGAAGCTT TTCCGGGTTG GGACATTCTT CTCAAAATCA GTTGCGATCT TGGTGAATGC AGAATCGTTC TCTGTGAACC TGGAGAGAAG CACAGATTGC AGAAGCTGCA GCTGAATTTT CCAAGTGATG ATGTTGCTTT TGCATTGAAA GACAATAAGG ATCTTCCATG GTTGCCCAAT TACTTGTGAG TTTTTGCTAG TTTAAGGAAA ACTTGGATAT TGATATGTAA CGCATAGTTT GATTTCTGGT GTATAAAGTA TAAATATTGT TACAAGACAA CC 
Length2082
Protein Sequence
Protein Residue
Map Locationscaffold_7: 12836275.. 12838494
Download Sequence
A.thaliana
AGI-codeAT4G14700.1
Descriptionorigin recognition complex 1
TAIR curator summaryEncodes origin of replication complex 1a subunit.The protein contains a PHD domain,binds methylated DNA and appears to function as a transcriptional activator.
Alias[ATORC1A][ORC1A][origin recognition complex 1]
Gene coexpression
MR
MR Locus Description
66.9776 Ahg483400 NAC domain containing protein 42
70.4202 Ahg312603 Wall-associated kinase family protein
77.0325 Ahg895336
81.2158 Ahg952267 ARF-GAP domain 8
86.7756 Ahg898036 Eukaryotic aspartyl protease family protein
91.6951 Ahg331636 Copper transport protein family
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression