Detail



ID : Ahg952267

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|952267|scaffold_50700001.1
Sequence
AAACCTAAAT TTCATCGTCT AATGGCTTCT GACAATCCAA CGGACAAAAA TATTGTTTTT AGAAAACTCA AAGCAAAATC TGAGAACAAG GTATGCTTTT TTTGTAGTGC CAAAAATCCG ACATGGGCAT CGGTTACATA CGGTATTTTT CTCTGCATCG ATTGTTCAGC CAATCATCGG AGCCTCGGTG TTCATATCAG CTTCGTCAAA TCAACGAATT TAGACTCATG GAGCCCTGAG CAGCTTAGGG CAATGATGTT TGGTGGGAAC TACCGCGCTC AGGTGTTCTT CAAGCAACAT GGATGGACGG ACAATGGCAA TATCGAGTCT AAGTACACTT CAAGAGCTGC TGATTTGTAT AGGCAGATTC TTGCTAAGGA AGTTGCTAAA GCCATCTCAC AAGAGACTAC CACTGATCAA CCAAAAGTAT CTCCTGGGTT TTCTTCTTAT TCTGTCAAGG AAGAGTTACC TCCCAAAGAA ACTTCTTCTG TGATACATGA AGCTACCAGT GCCACTTCTT CGCCTAAAGC TTCTAATGAA TTTTTGCCTA GTACATTTAC GAAACCTATC ATTGCTAAGA GGACAGGAAA AACTGGTGGT CTTGGTGCAA GGAAGCTTAC TACTAAGCCA AAGGAAAATC ATTATGAGCA GACCCCGGAA GAGTCTTCAC TGCTTATTCC TGCAGCATCT TCAGCTATTA ACCGCGGAAT CAAATCATCA GCTGCTTTTT CATCTGCCTC TCAGTTTGAG AACAATGACG ACTTGCAATC CGGAGGACAA AGCGGTGGTG GTGCACAAGT TCTTACCCAT GTTGCTCCAC CAAAGTCATC ATCAAGCTTC TTAGCAGATT CGGGAATGGA CCGCCCGTCG ATAGCTGAAG TTGAAGAATC AGATGAAGCA AGAAAGAGGT TCTCAAACGC AAAGTCCATT TCTTCTGCTC AGTTTTTTGG AGATGAGATG AAATCTGCTG GTCGTGATGA ATCAGAAACT ACCCTTGAGG GGAAGAATGA TTTCTGGTCG TTAGTGAACA AAGCAGCATG CGAAGTGAAG GAGAAGCTCT TGTCGAAATC GAATCATCAT CAAGATAAAG TGAATGACCT CCGTAGGGAA GTGACAATCT TGATGGAGAT ACTTCATGCC CAAGATGCTG ATGCCATCCC TCTTGTAACC CGGCAGAATT GGGCTCACTT ACTGTGTACA GAAGTAATTC TTACCACGCA GTCGATTTAA TCTATCTTGG GTTCTTGAGC 
Length1250
Protein Sequence
Protein Residue
Map Locationscaffold_507: 366.. 2571
Download Sequence
A.thaliana
AGI-codeAT4G17890.1
DescriptionARF-GAP domain 8
TAIR curator summaryA member of ARF GAP domain (AGD), A thaliana has 15 members, grouped into four classes.
Alias[AGD8][ARF-GAP domain 8]
Gene coexpression
MR
MR Locus Description
8.66025 Ahg896650 endoplasmic reticulum-type calcium-transporting ATPase 3
21.166 Ahg489315 Transducin/WD40 repeat-like superfamily protein
50.9411 Ahg931631 ACT-like protein tyrosine kinase family protein
61.6441 Ahg317999 Cornichon family protein
62.9285 Ahg342794 cysteine synthase C1
66.4229 Ahg907209 transcription factor jumonji (jmjC) domain-containing protein
71.7496 Ahg927285 BES1/BZR1 homolog 4
76.909 Ahg482750 ARF-GAP domain 7
81.2158 Ahg493435 origin recognition complex 1
85.9942 Ahg914606 nuclear factor Y, subunit A5
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression