Detail



ID : Ahg494134

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|494134|fgenesh2_kg.7__3567__AT5G38435.1
Sequence
GCAATGCATA GTCTCTCGTG GTTTCTGCTC GTCATTGGAT TGTCCGTAGG GTTGAGTAAC GCAAAGTGGA ATGAGAAAAA CGCTGTCTTC TTTAAGAATT CTCTTGGTCG GAACAAAGTC TTGAAAGTAA ATTGCATATC AAATGACGAC AATCTAGGCT TCCACTTTTT GCGTCCTGGA GAAACCTACG ATTTTAGTTT CCACGATAGT CTTTTCAAAT CAGAATTCTA TTGTGACCTA TGGCAAGGCC CTGATTTCAA GTTGCATGCA TCATTTATGG CATATGAAGG TGGTGGTTTC ATAGTTCATT ATGGTAAAAA GAACTTTTGG GATGCTAGAG AAGACGGGAT CTATTTCACC CATGGCCAAA AAATGCCCAA GTTAGAGTAT AAGTGGAAAT AATAATTAAC CACTCAAAAA AAGATGGAAT TTAACTCATC TTTTTGTTTT AATATGTAAA TGTATCTT 
Length468
Protein Sequence
Protein Residue
Map Locationscaffold_7: 22506725.. 22507175
Download Sequence
A.thaliana
AGI-codeAT5G38435.1
DescriptionS-protein homologue 8
TAIR curator summaryself-incompatibility (S) protein homolog, expressed at low levels in floral buds and very low levels in other plant tissues
Alias[SPH8][S-protein homologue 8]
Gene coexpression
MR
MR Locus Description
1.73205 Ahg925500
3.87298 Ahg494363
6.32456 Ahg944554
8.77496 Ahg947385 Heat shock protein 70 (Hsp 70) family protein
10 Ahg489807 SAUR-like auxin-responsive protein family
13.1909 Ahg314706 Ubiquitin-like superfamily protein
13.4164 Ahg474684 myb domain protein 72
17.7482 Ahg333621 glutathione S-transferase (class phi) 5
20.7123 Ahg494703
25.5734 Ahg340891 Oxysterol-binding family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression