Detail



ID : Ahg494425

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|494425|fgenesh2_kg.8__241__AT5G45600.1
Sequence
GAAGAAGAAG AAGATGACCT TAATTTTATC TGAGTGAAAT CTTAAATTAC CCAGAGAGAA GAATGACGAA CAGTTCGTCA TCGAAGAAAC AAGCTCAAGA TCAGCCTGAA ACTAGCGAAC CAACTCTCAA ATCACTCAAA GCCAAAATGA CTAAATCCGA CGAAAAGCAG AAGAAGCTTA AAGACATTGA AATAAGCGTT CCAATTGTGT ATGGTAATGT AGCATTCTGG CTTGGCAAGA AGGCTAGTGA GTATCAATCA CACAAGTGGG CAGTATATGT TCGAGGGGCA ACAAATGAAG ATATCAGTGT TGTAGTAAAG AAAGTTGTAT TTCAGCTTCA TTCTAGTTTT AATAACCCGA CGAGAGTTAT CGAGGAGCCT CCATTTGAGG TATCGGAATC TGGTTGGGGA GAATTCGAGA TTGCGATGAC ATTGCATTTC CACAGCGATG TCTGCGATAA GCCATTGAGT TTATATCATC ATTTAAAGTT ATACCCGGAA GATGAATCAG GTCCTTTGAC AATGAAGAAG CCTGTGGTTG TGGAATCTTA CGACGAGATT GTGTTTCCTG ATCCTTCAGA AAGTTTTCTA TCTAGGGTTC AGAATCATCC GGCTTTGACA TTTCCAAGAT TACCCTCTGG TTACAACTTG CCTGCTCCTA TGCAAGTGGA GGATACCGGC AAAAAGAAGA GAGGAGATAC GAAAGATCAT AGTTTGGGAC AATGGTTCAT GAGTTTCTCT GAAGCAGATG AGTTATTACA GCTCGCGGCT GCTCGTCAAC AGGTTCAAGC TCATATTGCG AAACTGAGGC GACAAATAAG TTTGCTAGAG GGACAGAATC AGACCGTGAA AACAGGATCA GACCTGTGAA TCTGATTCTG TAGCCATCTT CCATTGAGTT GGGAGATTGG TATGTTGTAA CATTACTGTG TATTAGCATA GATTTCCATT TATCTTGTAT TAATAAACAA CAACAAAAAG ATTAGTTTTA ATTTCTTATT ATAGGCTCTC TCTCCTCTGT TCCCGTTTCA T 
Length1031
Protein Sequence
Protein Residue
Map Locationscaffold_8: 1495772.. 1497571
Download Sequence
A.thaliana
AGI-codeAT5G45600.1
DescriptionYEATS family protein
TAIR curator summaryThe GSA41 human homolog is expressed in nuclei and binds NuMA, a component of the nuclear matrix in interphase nuclei. In addition to Arabidopsis, GSA41 is found in Drosophila, C.elegans, yeast and man.
Alias[GAS41][TAF14B][YAF9a][GLIOMAS 41][TBP-ASSOCIATED FACTOR 14B][homolog of yeast YAF9 a]
Gene coexpression
MR
MR Locus Description
6 Ahg900563 tRNAisopentenyltransferase 2
15 Ahg484160 NAC domain containing protein 35
20.199 Ahg945854 Actin-like ATPase superfamily protein
22.3159 Ahg473976 root hair initiation protein root hairless 1 (RHL1)
29.7825 Ahg944293 Pentatricopeptide repeat (PPR) superfamily protein
32.5883 Ahg926606 NADH:ubiquinone oxidoreductase intermediate-associated protein 30
34.6987 Ahg330836 Leucine-rich repeat protein kinase family protein
48.9081 Ahg489491 Glutamyl/glutaminyl-tRNA synthetase, class Ic
49.1325 Ahg921003 Pseudouridine synthase family protein
63.0159 Ahg472663 Protein kinase superfamily protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression