Detail



ID : Ahg330836

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|330836|fgenesh1_pm.C_scaffold_8000179
Sequence
ATGGAGATTT TTTTGATAAA GTTTCTTTTT TTAGGAATCT GGGTTTATTA CTCTGTTCTT GATTCTGTTT TTGCAATGGA TAGTCTCTTA TCTCCAAAGG GTGTTAACTA TGAAGTGGCT GCTTTAATGT CAGTGAAGAA TAAGATGAAA GATGAGAAAG AGGTTTTGTC TGGTTGGGAT ATAAACTCTG TTGATCCTTG TACTTGGAAC ATGGTTGGTT GTTCCTCTCA AGGTTTTGTG GTTTCTCTAG AGATGGCTAG TAAAGGATTA TCAGGGATAA TATCTACTAG TATTGGGGAA TTAACTCATC TTCATACTTT GTTACTTCAG AATAATCAGT TAACCGGTCC GATTCCTTCT GAGTTAGGCC AACTTTCTGA GCTTGAAACT CTTGATCTAT CTGGGAACCG GTTTAGTGGA GAAATCCCAG CTTCTTTAGG GTTCTTGACT CACTTAAACT ACTTGCGGCT AAGCAGGAAT CTTTTATCCG GGCAGATTCC CCACCTTGTC GCTGGCCTCT CAGGTCTTTC TTTCTTGGAT CTATCTTTCA ACAATCTAAG CGGACCAACT CCAAATATAT TAGCAAAAGA CTACAGGATT GTAGGAAATG CATTCCTTTG TGGTCCAGCT TCCCAAGAGC TTTGCTCAGA TGCTGCACCT GTGAGAAATG CGACAGGCTT GTCTGAGAAG GACAATAGCA AACATCACAG CTTAGTGCTC TCTTTTGCAT TTGGCATTGT TGTTGCCTTT ATCTTCTCTT TAATCTTTCT CTTCTTCTGG GTGCTTTGGC ATCGATCACG TCTCTCAAGA TCACACGTGC AGCAAGACTA CGAATTTGAA ATCGGGCATC TGAAAAGGTT CAGTTTTCGC GAAATACAAA CTGCAACGAG CAATTTTAGT CCGAAGAACA TTTTGGGACA AGGAGGATTC GGGATGGTTT ATAAAGGGTA TCTCCCAAAT GGAACTGTGG TGGCGGTTAA AAGATTGAAA GATCCGAATT ATACTGGAGA AGTTCAGTTT CAAACCGAAG TCGAAATGAT TGGCTTAGCA GTTCATCGTA ATCTTTTACG TCTCTTTGGA TTCTGTATGA CACCAGAAGA GAGAATGCTC GTGTATCCTT ATATGCCAAA TGGAAGCGTG GCTGATCGCC TGAGAGACAA TTATGGAGAA AAGCCGTCTT TAGACTGGAA TCGGAGGATA AGCATTGCAC TCGGCGCAGC TCGAGGACTT GTTTACTTGC ACGAGCAATG CAATCCAAAG ATTATTCACA GAGACGTCAA AGCTGCAAAT ATTCTACTTG ATGAGAGTTT TGAAGCAATT GTTGGAGATT TTGGTCTCGC AAAGCTATTA GACCAGAGAG ATTCACATGT CACAACCGCG GTCCGAGGAA CCATTGGACA CATCGCTCCT GAGTACCTTT CCACTGGACA GTCCTCAGAG AAAACTGATG TTTTCGGATT CGGAGTACTA ATTCTTGAAC TCATAACAGG TCATAAGGTG ATTGATCAAG GCAATGGTCA AGTTCGAAAA GGAATGATTT TGAGCTGGGT AAGGACATTG AAAGCAGAGA AGAGATTTGC AGAGATGGTG GACAGAGATT TGAAAGGAGA GTTTGATGAT TTGGTTTTGG AGGAAGTTGT GGAATTGGCT CTGCTTTGTA CACAACCACA TCCGAATCTA AGACCGAGGA TGTCTCAGGT CTTGAAGGTA CTAGAAGGTT TAGTGGAACA GTGTGAAGGA GGGTATGAAG CTAGAGCTCC AAGTGTCTCT AGGAATTATA GTAATGGTCA TGAAGAGCAT TCGTTTATTG TTGAAGCTAT TGAGCTCTCT GGACCACGAT GA 
Length1842
Protein Sequence
Protein Residue
Map Locationscaffold_8: 1375098.. 1377828
Download Sequence
A.thaliana
AGI-codeAT5G45780.1
DescriptionLeucine-rich repeat protein kinase family protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
14 Ahg934677 LATERAL ORGAN JUNCTION
26.7395 Ahg935672 Protein of unknown function (DUF1295)
27.2764 Ahg897256 TRAF-like family protein
34.6987 Ahg494425 YEATS family protein
44.6094 Ahg935305 Pectin lyase-like superfamily protein
54.4977 Ahg943245 calcium-dependent protein kinase 21
62.6259 Ahg332265 Polymerase/histidinol phosphatase-like
90.9285 Ahg470349 Prefoldin chaperone subunit family protein
94.9105 Ahg485697 Thioredoxin superfamily protein
96.9175 Ahg479131 Transducin/WD40 repeat-like superfamily protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression