Detail



ID : Ahg494532

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|494532|fgenesh2_kg.8__348__AT5G44560.1
Sequence
AACTTTTGCC TCTACTCAAT ACTCTCGATT TGAGAAGAGA GAAGAGAAAT CGCCATGAAC ATCTTCAGGA AGAAGACCAC TCCCAAAGAT GCTCTTCGTA CCAGTAAGAG AGAAATGGCT GTGGCTACAC GAGGTATCGA ACGGGAGATT ACATCTCTTC AACTAGAGGA GAAGAGACTA GTTGCAGAGA TCAAGAAAAC AGCTAAGACT GGAAATGAGG CTGCCACAAA GATTTTAGCT CGTCAACTTG TTCGATTGAG GCAACAGATT ACCAACTTAC AGGGAAGCCG TGCTCAAATT AGGGGTGTGA CGACTCATAC ACAGGCTCTG TATGCCAGCA CTTCAATATC ATCTGGCATG AAAGGTGCTA CCAAAGCTAT GGTTGCAATG AACAAGCAAA TGGCACCCAC TAAACAAGCC AAGGTGATTA AGGATTTCCA GAAGCAGTCG GCACAGCTAG ACATGACGAT AGAGATGATG TCAGAGGCAA TTGATGAAAC ACTTGACAAA GATGAGGCTG AAGAAGAAAC CGAAGATCTC ACTAACCAAG TTCTTGATGA GATTGGTGTT GGTGTTGCAT CACAGCTATC TTCAGCTCCA AAAGGTCGGA TTGCTACAAA AACCGCAGCT CCTCCCGCTT CCACTGCAGC AACTAAAAAG AACTCTGAAT CAAGTGAAGT GGATGAGCTT GAGAAGAGGT TGGCTTCGCT TCGACGAATC TGAGATGTAT GAAAAGAGAG CAGCTTCCTT TCTTTTTGTT ATCTCTGTAT AAATCTGCTG AAACTTAAGC TGTTTGATAC TAAGATTGAT CATCAGAAAA CTAAAAGGCT TTTTAAGAAA AGTTGAAGAC ATGTATACAC ATATTTTACT AAAGATAGTT CCTCTACGT 
Length889
Protein Sequence
Protein Residue
Map Locationscaffold_66: 14061.. 16816
Download Sequence
A.thaliana
AGI-codeAT5G44560.1
DescriptionSNF7 family protein
TAIR curator summary
Alias[VPS2.2]
Gene coexpression
MR
MR Locus Description
13.0384 Ahg918959 WEE1 kinase homolog
22.5832 Ahg342300 Heavy metal transport/detoxification superfamily protein
30.0666 Ahg484830 P-loop containing nucleoside triphosphate hydrolases superfamily protein
31.9374 Ahg325157 Uncharacterised conserved protein (UCP030365)
42.2847 Ahg943189 EPS15 homology domain 2
54.2218 Ahg916282
60.4483 Ahg488819
67.9485 Ahg932988 Cyclin B1;4
70.993 Ahg925517 cytochrome P450, family 96, subfamily A, polypeptide 3
84.4926 Ahg474084 alpha/beta-Hydrolases superfamily protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression