Detail



ID : Ahg494855

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|494855|fgenesh2_kg.8__671__AT5G48030.1
Sequence
TCTTCTACAC AGTTCTGCAG CAACAAAACA GGGTTTTTGC TAGGGTTTTA ACTTTGGCTG CTCTGTCTCA ATCTCTGGAG ACTTAAACCC ACTTACTAAA TCTCCATTGA ATTTGGGTAG AAGCTTAAAG ATCGAAGCTT GAAAAAGCCT CGAGTAAAAA TGGTCCCTTC CAATGGCGCA AAGGTTCTTC GCTTGTTGAC TCGTCGATGT CTCTCTTCAT CGCTTCTTCA AGATTTAGGC AATCAGAAAC TGAGAGGAGT ATGTATTGGG AGTTATAGGA GATTGAATAC AGGTGTTGGC AATCATGCCA AGGTTCTTGG AGATTACGCT TCAAAATCTG GACATGATCG GAAATGGATC AACTTTGGAG CTTTTAATAC TAATTTTGGT TCAACAAGGT CATTTCATGG AACAGGTTCG TCGTTTATGT CTGCTAAGGA CTACTATAGT ATTCTTGGAG TGAGTAAGAA TGCACCAGAA GGTGAAATCA AGAAGGCTTA TTATGGGCTA GCTAAGAAAC TCCATCCTGA TATGAATAAA GATGACCCAG AAGCTGAGAA GAAGTTCCAG GAGGTCTCAA AAGCATATGA AATTTTGAAA GATAAGGAGA AGCGTGACCT TTATGACCAG GTTGGTCATG AAGCATTTGA GCAAAATGCT AGTGGTGGGT TTCCAAATGA TCAAGGCTTC GGTGGTGGTG GTGGTGGGTT TAACCCATTT GATATCTTTG GGAGCTTCAA TGGCGATATT TTCAACATGT ACCGGCAAGA TATTGGAGGT CAAGATGTCA AGGTTATGCT TGATCTTTCT TTCATGGAAG CTGTTCAAGG ATGCTCCAAA ACTGTGACTT TTCAAACCGA GGTGGCTTGT AATACTTGTG GTGGACATGG TGTTCCTCCT GGTACCAAAC GAGAGAAATG CAAAGCCTGT AATGGCTCTG GGATGACATC AATGAGAAGG GGTATGTTAA GCATCCAAAC GACTTGCCAG AAGTGTGGTG GAGCTGGTCA AACGTTCTCA AGTATTTGCA AATCCTGTAG AGGGGCTAGA GTTGTTCGAG GACAGAAGTC AGTGAAAGTC AATATCGATC CAGGGGTTGA CAATAGTGAT ATATTAAAGG TGGCAAGGGT GGGTGGGGCT GATCCTGAAG GTGACCAGCC TGGAGATCTT TATGTTACTC TCAAGGTTCG TGAAGATCCT GTGTTCCGCA GAGAAGGATC AGATATTCAT GTGGATGCGG TTCTCAGTGT TACCCAGGCC ATTCTTGGAG GAACCATTCA AGTTCCAACC CTCACCGGTG ATGTTGTCGT GAAGGTCCGT CCTGGAACCC AACCTGGTCA CAAAGTAGTG CTAAGAAATA AAGGTATTAG AGCAAGAAAG TCGACTAGAT TTGGGGATCA ATATGTGCAT TTCAACGTCA GCATCCCTGC AAATATAACG CAGAGACAGC GTGAACTGCT TGAGGAATTT AGTAAAGCAG AACAAGGTGA ATACGAGCAG CGCACAGCAT CTGGATCTTC CCAGTGAAAA CTGCAAATGC TTCTATAAGC TTAAAATGCT ATTGTTGTGG CTGTATCAAT GGATATATAT CAATCAGACA ATGATTGAGA TTATATTGCG TAGGATTAGT GAGAGTATTG TCTGGGTTTT ACTTTTAACT AATTCTACAA TGCTAGAAAG ATAAAAAGAA GGCAAAGCAT GTGCTGTGCT GTTATTGCCT TCTGAAAGTT ATAGAACTTA TGATACGGTT CATTTTTTTT 
Length1760
Protein Sequence
Protein Residue
Map Locationscaffold_8: 10031626.. 10038060
Download Sequence
A.thaliana
AGI-codeAT5G48030.1
Descriptiongametophytic factor 2
TAIR curator summaryencodes a mitochondrially targeted DNAJ protein involved in female gametophyte development.
Alias[GFA2][gametophytic factor 2]
Gene coexpression
MR
MR Locus Description
7.93725 Ahg471136 SKP1-like 18
14.0712 Ahg470695 P-loop containing nucleoside triphosphate hydrolases superfamily protein
21.3307 Ahg920318 ARM repeat superfamily protein
25.2982 Ahg487773 mitochondrial HSO70 2
26.4575 Ahg353700 DNA topoisomerase, type IA, core
26.7208 Ahg487419 splicing factor-related
28.8444 Ahg941057 DNA/RNA polymerases superfamily protein
31.1448 Ahg478250 Fes1A
32.7261 Ahg921775 translocase outer membrane 20-2
34.4964 Ahg485785 Mitochondrial substrate carrier family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression