Detail


ID : Ahg494934

Blast(Query):  A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|494934|fgenesh2_kg.8__750__AT5G48680.1
Sequence
ATTAGGGTTT TGTAACTTTG GAGAGCTCAA CTTCTGTTTC ATTCTTCTCC CTAGGGTTTA GGGTTCTTTT TTTTTTTTGT CTTCCCCCAT TCGATATGTA TTCAGATCAA GTGGTGGCTG AAACTAGAAT CAGCAAATCG TTAAAGAACC GCCTCAATGG CGCTTCCGGT GACGTCTCTT CTCGCGGCAA ACAACAACAA GTCACGAGGA AGAGAGGAAG GCAGGATGAT GATAAGTGGG AGCATGATCT TTTCGATGAC GACGACGTGC CTCGGCTTTC AAAACGCAGA TTTGATCCTA AAGATCTCCG CTTGAAGCTC CAAAAGAAAC ATCATGGCTT GCAAATTGGT GGACGAGTGT TTAGTTTGAG CGTCGGGGAT CTACGGAATA AGCTATCCGG GACAGTGAAT CCACAAACAA AGAACAGTAA AAGGGAGGCT GTTAGACCAG CTATAAAGAA GGTTGCAGGG GTAACCAAAT CCGAGACTAG AACGGCTCCG AACAGAGTAA TCAAGAAGAA ACCACAGCAG AATGATGCAT CGGTTGATAG CTTCCTGGAA TCATTGGGTC TCGAGAAATA TTCGACCGCA TTTCAAGTGG AAGAAGTTGA TATGGATGCT CTCAGGCATA TGACAGATGA TGACCTCAAA GCTCTGCTCA TACCAATGGG ACCTAGGAAG AAGATACTTC TTGCCTTGGG ATCTAAACGT GGATAGTCCA GCTTCTCAAG CTTAGGTGCA TGATGATACA TCTGGGATAT TGTCAGAAAG ATGCTGCATT TTGACTTTTC ATTGTCTTTT TCCTTTCTCA TCTGTATCTC AAGAGACAAC AAGTAGTTAG AGTTTTGAGA TTAAACAGTT GTAACCTTTT AACATAGAGA GAGAGACAAG AAGAGCAATG TTGCAATGTG CTTAAGATCT TGCTTCACAA GAAAACAAAC TTGTGACTGG AAGGTAAGAC ACAAGAGTTG ATCATTAACC
Length980
Protein Sequence
Protein Residue
Map Locationscaffold_8: 11406943.. 11408685
Download Sequence
A.thaliana
AGI-codeAT5G48680.1
DescriptionSterile alpha motif (SAM) domain-containing protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
17.0587 Ahg491280 Protein kinase superfamily protein
36.606 Ahg492561 Ubiquitin-like superfamily protein
37.108 Ahg325616
37.5233 Ahg939118 ARM repeat superfamily protein
39.7492 Ahg944648
40.2989 Ahg927299 ubiquitin-conjugating enzyme 35
43.1972 Ahg910790 Transducin/WD40 repeat-like superfamily protein
46.744 Ahg903431 lon protease 3
50.04 Ahg482122 cofactor of nitrate reductase and xanthine dehydrogenase 2
51.5752 Ahg492970 Transducin/WD40 repeat-like superfamily protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression