Detail


ID : Ahg494988

Blast(Query):  A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|494988|fgenesh2_kg.8__804__AT5G49270.1
Sequence
TTTCTTTCTC CAAGTAAACC TAACTTTCTT TGGAGAACGA CACAATGGGC TTTCTCCTTC CGATTTTATT CGGAGTGTTA CTCTTATTAA CCGTTACTCC ACCGTCTATG TCTCAGCTTC CTCCAACAAT AATGGCTCCG GCACCGGCCC CGACTTCGCC ATCAGATCTT TGCAATGGAA TATTTCTCTC TTATGAATTC ATACTCGGTC GCAAGATCCC TCCAAACGAC ACAACCGATC AGCCTTATCG GTTTGAGTCT GTCCTTACGG TTCTAAACAA TGGCCGGGAA GAGCTAAAAG AATGGAGAGT TTTTGTTGGA TTCCAACACA ACGAAATCCT TATTTCCGCC ACCGATGCAT TAATAGTCAA CGGGACGGAG CTTCCTGCTT TGGTAGGAAA TGGTACCATC CTCGGTGGCT ATCCGGTCTC CGACCTCAAA ACGGCTATTC AAACGGCCGG AGACTTGAAG CAAATGACGG CTGAGATCGA ACTTGTCGGG ACTCAGTTCA TGGTGGCCCC TCCGGCGATT CCTTTGCCGT CCAACATATC GCTTGTTAAC GATGGTTGGC TCTGTCCTGA GCCTACTCTT CAAAGCAAAA GAGAGCTAAC GACCTGCTGC ATGAGAGACA CAAACATTAC AGTCAACACA ACAATCACCA CCAAATTCCT CCCACGACAA CCCGGAGACT TGACCATAAT GTACGACGTG ATCCGAGCCT ACGACCAGAA CTACCTAACC GAAGTAACCA TGGAAAACCA CAATCCACTA GGCCGACTCG ACCATTGGGA GCTTAGTTTC GACTGGATGC GAGACGAGTT CATACAGAAG ATGCAAGGCG CATATCCAAC GGTCGTGGAC GCCACGAAAT GCATCTTTGG TCCTCAGTCT CTAATCTACA CTGGTCTAGA TTTCGCTGAC GTTCTCACAT GTGAGAGACG ACCAATCATC ATAGACTTGC CTCCGACCAA AAAAGATGAC ACTACTTTAG GCAATATTCC TTCTTGCTGC AGAAATGGTA CAATCTTACC ACGTATCATG GACCCTTCCA AATCAGTCTC CGTCTTCACG ATGCAAGTTG CCAAAATGCC TCCTGATTTC AACCGATCCG CGCTTTTCCC ACCGCAGAAC TGGAGGATTA AAGGGACGTT AAACCCGGAT TACTCGTGCG GGCCACCCGT TCGGGTAAGC CCGACTTTTT ATCCGGATCC GAGCGGTATG CCTACTAACA AATCATCTTT CGCCAGCTGG CAGATTGTAT GCAACATCAC GCAAGCCAAA ACCGAGATAC CAAAATGTTG CGTCTCCTTC TCTGCTTTCT TCAACGACTC TATCATCCCT TGTAACACTT GCGCTTGCGG TTGCGTGTCG GAAACGCGAC GCACCTGCAG CGCGGAGTCT CCGTCTCTTC TCATCCCTCC AGACGCTCTT CTCTTACCTT TCGAAAACAG AACCGCTCTA ACGCTTGCTT GGAACGCACT CAAACACAAA ACCCTACCTA ACCCGATGCC GTGTGGCGAC AATTGCGGTG TATCAATTAA CTGGCACATG GCGTCGGATT ATAGAGGTGG TTGGACCGTG AGGATCACGA TTTTCAACTG GGGAGAAATC GATTTCCCCA ACTGGTTCCT CGCGGTTCAG ATGAAAAAAC CGGCGCTTCT AGGGTTCGAA AAAGCCTACT CATTCAACGC AAGTCTCCTA AGCGTGGACG GAGGTGTCAA CAACACGATT TTTATGGAAG GTCTTCCTGG TCTGGATTAT CTTGTGGCGG AGGCTGATGA AAAAGATCCA AAGAAGAAGA ATATTAGGAT TCCGGGTAAA CAACAATCGG TGATACAGTT CAGCAAGAAA CTTACGCCGG GGATTAATGT GGCGGAACGT GACGGGTTTC CGGCGAAAGT GATATTTAAC GGCGAGGAAT GTTTGCTTCC TGATCTGCTT CCGATGGCTA GTGGTGGCAG ACGAAATGGG GCTATCACGG TTTTGTCCTT TATAACGTTT TATGTTGCGG CCTTTATAAT TCGGTTATAA GTTTTTTTCT AGGGTTTATT ATACTCTGTT TTGTTGATTG ATTAATTTGT TTTGTAAAAT AAACCTGATT TCTTTACTGC AGTTGTTTGT AAAACCATGC AATATTCTAG
Length2140
Protein Sequence
Protein Residue
Map Locationscaffold_8: 12218289.. 12220980
Download Sequence
A.thaliana
AGI-codeAT5G49270.1
DescriptionCOBRA-like extracellular glycosyl-phosphatidyl inositol-anchored protein family
TAIR curator summaryInvolved in successfully establishing tip growth in root hairs.
Alias[COBL9][DER9][MRH4][SHV2][COBRA-LIKE 9][DEFORMED ROOT HAIRS 9][MUTANT ROOT HAIR 4][SHAVEN 2]
Gene coexpression
MR
MR Locus Description
20.9284 Ahg930634 Vacuolar iron transporter (VIT) family protein
24.9199 Ahg906590 Cysteine/Histidine-rich C1 domain family protein
38.6523 Ahg485821 alpha/beta-Hydrolases superfamily protein
40.3485 Ahg898884 RNI-like superfamily protein
42.1426 Ahg930422
43.1509 Ahg316947 Pectin lyase-like superfamily protein
45.4313 Ahg916304
55.2811 Ahg355720
63.5925 Ahg947825
80.6474 Ahg341831
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression