Detail



ID : Ahg495229

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|495229|fgenesh2_kg.8__1045__AT5G51590.1
Sequence
CTGAATCTTA CGTCCTCTGG ATCTTTCTTC TCTCTCTCTT GTCTATACTT TAAGTGTCTG TCTGAAGAAG CTTGAATCTG TCGTGATCAT CAAGATTCAA GTTCTGTCTT TAATTGTCGG AATCAGAATC TTTCAGATGG AGGAGAGAGA AGGAACTAAC ATCAGAACCA GTTTTGGTCT GAAACAACAT GAAGCTCCTC TTCTTCCTCC TCCTGGTTAC CACATGGAAC CACCACGGTC TGAAAACCCT AATCTTTTTC CGGTGGGTCA ATCCAGCACT TCCTCCGTCG CCGCCGCCGC CGTGAAAGCT TCTGAGAATG TTGCTCCTCC TTTTAGCTTA ACAATGCCGG TGGAGAATTC TTCTTCTGAC TTGAAGAAGA AGAGAGGGAG ACCGAGAAAG TATAACCCTG ACGGCTCACT CGCTGTGACT CTCTCTCCAA TGCCTATCTC CTCCTCCGTT CCGTTGACGT CTGAGCTTGG TTCTCGGAAA CGAGGAAGAG GGCGAGGAAG AGGCAGAGGA AGAGGACGTG GACAAGGAAG TAGAGAGCCT AACAGCGACA ACAACAACAA CAATTGGCTC AAGAATCCTC AGATGTTCGA ATTTAACAAC ACTCCTAGTT CTGGAGGTGG AGGACCTGCT GAGTTTGTCA GTCCAAGTTT TACACCTCAT GTGCTCACAG TAAACGCCGG TGAGGATGTG ACAATGAAGA TAATGACATT CTCTCAACAA GGCTCGCGTG CTATTTGCAT TCTTTCAGCT AACGGTCCCA TTTCCAATGT TACAATTCGT CAATCTATGA CATCTGGTGG TACTCTCACT TATGAGGGTC ATTTTGAGAT TCTGTCTTTG ACGGGTTCGT TTATACCAAG CGAGAGTGGA GGAACCCGAA GCAGAGCTGG CGGGATGAGT GTGTCTCTTG CAGGACCAGA TGGTCGTGTC TTTGGTGGTG GACTTGCCGG TCTCTTTATA GCCGCTGGTC CTGTTCAGGT AATGGTGGGG AGTTTTATAG CGGGTCAGGA GGAATCGCAG CAACAGCAGC AGCAGCAGCA GATAAAGAAG CAAAGAAGGG AAAGACTCGG GATCCCGACA ACAACACAAG CTTCTAATAT CTCATTCGGT GGATCAGCAG AAGATCCAAA GGCTAGATAC GGTCTCAACA AGCCTGTTGT TATTCAGCCA CCACCTGTGT CCGCACCACC TGTGTCCTTT TCGCATGAGC CAAGTACTAA CACAGTCCAT GGTTACTATG CAAATAACAC AGCTAACCAT ATCAAGGATC TCTTCTCACC CCTCCCAGAA GAAGATGAGG AAGAAGATGA AGAGGATTTA GAAGGTGAAG ATGATGAAGA ATTTGGAGGC CATAGCGAAT CTGACACCGA GGTTCCAAGC TGATGATCGA TGGAAAGAAT CCGACATTGA TCAGTCATAA TCTTGAGTTG TTGCGACATT TTTATTTCGG TGTCTTCAGA TTTTTTTAGA GTGTAATGTA AACAGAGATA TTTCACTAAA AGTTAGGGTT TACTAGAGGA TGTAATCTTT AGGGTTCTTT GACTTGTGTC TTTCTTTTTA TCCCCAAGTG GTTGTTGTAG AACTTCAAAA CTTAGTGTGT GTTCAAACTC TCTCCTTAAA TCAA 
Length1634
Protein Sequence
Protein Residue
Map Locationscaffold_8: 13748683.. 13751158
Download Sequence
A.thaliana
AGI-codeAT5G51590.1
DescriptionAT hook motif DNA-binding family protein
TAIR curator summary
Alias[AHL4][AT-HOOK MOTIF NUCLEAR LOCALIZED PROTEIN 4]
Gene coexpression
MR
MR Locus Description
15.4919 Ahg488257
25.7488 Ahg916961 basic helix-loop-helix (bHLH) DNA-binding superfamily protein
40.2492 Ahg478803 growth-regulating factor 5
50.9608 Ahg486927 cation exchanger 4
61.8466 Ahg482616 growth-regulating factor 3
66.8805 Ahg475065
67.7348 Ahg473862 heat shock transcription factor B4
68.2642 Ahg484096 RING/FYVE/PHD zinc finger superfamily protein
73.1984 Ahg949608 Squamosa promoter-binding protein-like (SBP domain) transcription factor family protein
74.2428 Ahg324227 N-acetylglucosaminyl transferase component family protein / Gpi1 family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression