Detail



ID : Ahg478803

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|478803|fgenesh2_kg.3__1504__AT3G13960.1
Sequence
GAAGGTGGTC ATCTTTGTCT GTCTCTGTCC GAAACTCAGG AGCCCTAATC TCTGAATCCA TCAAGAAAGC TCTTATCTTC CTTCTTTTAT GTTTCTGATT TTGCTACATA TATAAATAAA CCCTCTGAGG AAAGCTAGAG AAGAAGATGA TGAGTCTAGG TGGAAGTAGT GGGAGAACAA TAGGAAGGCC TCCATTTACA CCAACACAAT GGGAAGAACT GGAACATCAA GCCCTAATCT ACAAGTACAT GGTCTCTGGT GTTCCTGTCC CACCTGAGCT CATCTTCTCC ATTAGAAGAA GCTTGGACAC TTCCTTGGTC TCTAGACTCC TTCCTCACCA ATCCCTTGGA TGGGGATGTT ACCAGATGGG GTTTGGAAGA AAACCAGATC CAGAACCAGG AAGATGCAGA AGAACAGATG GTAAGAAATG GAGATGCTCA AGAGAAGCTT ACCCAGATTC AAAGTACTGT GAAAAACACA TGCACAGAGG AAGAAACCGT GCCAGAAAAT CTCTTGATCA GAATCAGACA AGAACAACTC CTCTAACATC ACCATCTCTC TCATTCCCCA ACAACAACAA CCCAAGTCCC ACCTTGTCTT CTTCTTCTTC ATCTTCAACT ACTTATTCTG CTTCTTCTTC TTCGATGGAT GCCTACAGTA ACAGTAATAG GTTTGGTGTT GGTGGAAGTA GTAGTCACAC TAGAGGTTAC TTTAACAGCC ATTCTCTTGA TTATCCTTAT CCTTCTACTT CACCTAAACA ACAACAACAA CCTCTTCATC ATGCTTCCGC TTTGTCACTT CATCAAAACA CTAATTCTAC TTCTCAGTTC AATGTCTTAG CCTCTCCTAC TGACCACAAA GACTTCAGGT ACTTTCAAGG AATTGGGGAG AGAGTTGGAG TTGGGGAGAG AACGTTTTTT CCAGAAGCAT CTAGAAGCTT TCAAGATTCT CCATACCATC ATCACCAACA ACCGTTAACA ACAGTGATGA ATGATCCGTA CCACCACTGT AGTACTGATC ATAAGATTGA TCATCATCAT CAGACATACT CATCCTCATC ATCATCTCAA CAACATCTTC ATCATGATCA AGAGCATGAT CATCGACAGC AACAGCAACA GTGTTTCGTT TTGGGCGCCG ACATGTTCAA CAAACCCACA AGAAGTGTCC TTGCAAACTC ATCAAGACAA GATCAAAATC AAGAAGAAGA GGAGAAAGAT TCATCGGAGT CGTCGAAGAA GTCTCTTCAC CATTTCTTCG GTGAGGACTG GGCACAGAAC AAGAACAGTT CAGATTCTTG GCTTGACCTT TCTTCCCACC CAAGACTCGA CACTGGTAAT TAATTAAATA GAGCTAGCAT CAATGATGGA TCTGCACCAA CACACACAAC TGTGAAATGT TGAAGAAGAG TCAAATTTCA CATCTATTTC CGTGGAAGGA TGAGACAAGA CACTGTTTGC AGAATCCTGT AATACATTTA TGTATTTTCT ATCGTTTTCT ATGTGTGTTA GGTCCAACAA GAAAAAGTGA TCCGACAGAT ATATATCTGT ATGTGTTCTC TTGCTTTCTC AAGAAATCAG TTTTTATTTT 
Length1590
Protein Sequence
Protein Residue
Map Locationscaffold_3: 5454193.. 5456190
Download Sequence
A.thaliana
AGI-codeAT3G13960.1
Descriptiongrowth-regulating factor 5
TAIR curator summaryGrowth regulating factor encoding transcription activator. One of the nine members of a GRF gene family, containing nuclear targeting domain. Involved in leaf development and expressed in root, shoot and flower.
Alias[AtGRF5][GRF5][growth-regulating factor 5]
Gene coexpression
MR
MR Locus Description
25.8263 Ahg330506 GTP binding;GTP binding
26.9258 Ahg475096 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein
34.2783 Ahg496986 Chalcone-flavanone isomerase family protein
40.2492 Ahg495229 AT hook motif DNA-binding family protein
40.2492 Ahg481536 AGC (cAMP-dependent, cGMP-dependent and protein kinase C) kinase family protein
45.793 Ahg922469 Terpenoid cyclases/Protein prenyltransferases superfamily protein
47.3286 Ahg920142
50.5569 Ahg491740 Protein of unknown function (DUF630 and DUF632)
59.0424 Ahg316947 Pectin lyase-like superfamily protein
60.9262 Ahg489025 Argonaute family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression