Detail



ID : Ahg495658

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|495658|fgenesh2_kg.8__1474__AT5G55720.1
Sequence
ATGTCAATTG TATGTACGAT TTTCTTGTTT CTCTTAACCG TATCTTCTGC GTTCGCGTTT GCGGTTCCTA AACCGCCAAT CGTAAGGCAA CTATCAACAT CAGTGACATC AAATTCAACA GCTTCTTGCT CAGCAAATGG AAATCCAATC GATGACTGCT GGAGATGCGA TGAAAACTGG AAGGACAACC GCAAAAACCT CGCGGATTGC GCGGTTGGAT TTGGACGCGA CTCCATTGGC GGTAGAGCCG GAGAGTTCTA CACAGTAACT GATTCAGGAG ACGACAATCC TCTAAATCCA TCTCCAGGTA CATTACGGTA CGCTGCAACA CAAGATCAAC CTCTATGGAT CATTTTTGAT CGAGACATGG TAATACAACT AAAACAAGAT CTCCAAGTAG CATCATATAA AACCATTGAT GGTAGAGGAA ATAACGTGCA AATAGCTTAT GGGCCGTGTT TAACTTTATA TAAAGTAAGT AATGTTATTA TAAACAATCT TTATATTCAC GATTGTGTTC CGGCGAAACG GAATGCTTTA TCGTCGTTGG GAGGATACTC GGATGGAGAT GGAATCTCGA TATTCGAGTC TCGAGATATT TGGATTGATC ATTGTACGTT AGAGAAATGT TACGATGGGC TTATTGATGC GGTGAATGGA TCAACGGATA TAACGATTTC GAATAGTTAC ATGTTGAATC ATAATGAAGT CATGCTTTTG GGTCATAGTG ATGAGTATTC CGGTGATCGG GATATGCGAG TTACGATCGC ATTTAACTAT TTTGGTGAAG GACTTGTCCA GAGAATGCCG AGGTGCAGGC ATGGATATTT TCACATAGTG AATAACATTT ATAGAGAGTG GAAGATGTAT GCTATCGGTG GAAGTGCTAA TCCAACGATA TTTAGCCAAG GAAATGTTTT TATAGCTTCC AATAATCAGT TCACCAAGGA GGTAACAAAG CGAGAGAGTG CAGATGGAGA CGAAGAATGG AAGGAATGGA ATTGGAAATC AGAAGGAGAT GAAATGGTTA ACGGCGCTTA CTTTACACCG TCAGGGAAAG AGGATTCTCC GAGCTATGCG AAATTTTCGA GTATGGTAGC TCAACCAGCT TCACTTCTCA AGACCACACA TCCATCAGTA GGTGTTCTTA GTTGTGAAAT TGACCAAGCT TGTTAAAACA CAAACATAAG CTTGTGACCA AATCTAGTAA TGTCCTTCTT CTTCTTTTTT TCTTTTACTT CTTCTTCTTG TGGTTATTGT TATAGCACAT AGGATTTGTA TTGAATATGA TGATCATAGA CCCAAACAAC AATTGTTCAT TGTCAATTTT TTACCAAAAA TTTCTATTAA GAGTCACTAA GTTTCGTCAG ATATTTTTAT AAATACATAA AAATTACTT 
Length1399
Protein Sequence
Protein Residue
Map Locationscaffold_8: 16110561.. 16112274
Download Sequence
A.thaliana
AGI-codeAT5G55720.1
DescriptionPectin lyase-like superfamily protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
16.7332 Ahg931096
28.7054 Ahg323593 Plant protein of unknown function (DUF247)
35.1426 Virus0930
35.1568 Ahg479186 Plant invertase/pectin methylesterase inhibitor superfamily protein
35.4965 Ahg913545 Cellulase (glycosyl hydrolase family 5) protein
37.8682 Ahg922973
45.8694 Ahg476218 MLP-like protein 31
49.5681 Ahg890791
60 Ahg949974
61.0328 Ahg898752
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression