Detail



ID : Ahg496014

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|496014|fgenesh2_kg.8__1830__AT5G58910.1
Sequence
ATGACGAACA CCACGAAGCT GTGCTCGTCG AAGCCCATCG TCACCGTCAA TGGAAAGTTT CCGGGCCCCA CCATTGTTGC AAGAGAAGAC GACACTCTTT TGATCAAAGT TGTGAATCAC GTGAACTACA ACGTCTCCAT CCACTGGACA GGTTGGGCAG ATGGACCGGC TTACATAACA CAATGTCCTA TCCAACCGGG ACAGAATTAT CTCCACAATT TTACATTGAC GGGTCAACGA GGAACCCTAT GGTGGCATGC TCACATCTTG TGGCTTCGTG CCACGGTGCA CGGCGCCATT GTCATCTTGC CTAAGCTCGG TGTCCCATAC CCTTTCCCTA AGCCCTACAA AGAGAAAACA ATTGTTCTTA GTGAATGGTG GAAATCGGAC GTGGAAGAAC TTATAAACGA GGCTTCAAAA ATTGGAACAG CTCCTAGCGC TTCTGATGCA CATACCATCA ATGGTCATTC AGGCTCCATC TCTAATTGTC CTTCCCAAAG TAGTTACGGT TTACCGGTGA GAGCAGGAAA GACGTACATG TTACGGATCA TCAACGCGGC ATTAAACGAA GAGCTCTTCT TTAAAATTGC TGGTCACGTA CTAACCGTTG TAGAAGTTGA TGCTGTTTAC ACCAAACCGT ATAAAACTGA CACAGTATTC ATCGCCCCGG GACAGACTAC TAACGTTCTC TTAACAGCAA ACGCAAACGC TGGTTCCAAT TACATGGTCG CCGCCACAAC ATTTACGGAC GCTCAAATCC CATACGACAA CGTCACAGCC ACCGCCACTC TCCACTACAT CGGCCACACT GCCACCGTTT CTGCCTCCAA AAAGACCGTT CTCGCATCAC TTCCGCCGCA AAACGCAACT TGGGTTGCGA CCAAATTCAC TAGATCACTC CGGAGCTTGA ACTCCCGCGA GTATCCGGCT AGGGTTCCAA CAACCGTGGA CCATTCCTTG TTCTTCACGG TAGGTCTTGG TGCAAACCCT TGCCAGAGCT GCAACAACGG TGTTCGCTTA GTGGCCGGAA TAAACAACGT AACGTTTACC ATGCCTGAGA CCGCTTTGCT CCAGGCTCAT TTCTTTAACA TTTCCGGCGT GTTTACCGAT GACTTCCCGG CGAACCCCTC GAATCCGTAT GACTATACGG CACCGGTAAA GATCGGCGTT AATGCTGCAA CGATGAAAGG GACAAAGCTT TACAGGCTTC CATACAACGC GACGGTGCAA ATTGTTCTGC AGAATACAGC GATGATCTTG TCCGATAACC ATCCGTTTCA TCTTCACGGG TTTAACTTCT TCGAAGTCGG TAGAGGTATG GGGAACTTTA ACCCGGAAAA AGATCCGAAA ATGTTCAATT TAGTGGATCC GGTAGAAAGA AACACCGTTG GAGTTCCAGC CGGTGGTTGG ACTGCCATTA GATTCATCGC CGACAATCCA GGGGTGTGGT TCATGCATTG TCACTTGGAA TTACATACAA CTTGGGGATT AAAGATGGCA TTCGTCGTCG ACAATGGTCA CGGCCCTGAC CAGGCATTGC TTCCTCCACC CGCCGATCTT CCCAAATGTT AG 
Length1572
Protein Sequence
Protein Residue
Map Locationscaffold_8: 17685202.. 17690108
Download Sequence
A.thaliana
AGI-codeAT5G58910.1
Descriptionlaccase 16
TAIR curator summaryputative laccase, a member of laccase family of genes (17 members in Arabidopsis).
Alias[LAC16][laccase 16]
Gene coexpression
MR
MR Locus Description
7.81025 Ahg493720 Leucine-rich repeat protein kinase family protein
11.5758 Ahg481932 laccase 3
21.095 Ahg475725 Subtilase family protein
23.2379 Ahg487975 RNA-binding (RRM/RBD/RNP motifs) family protein
23.2379 Ahg494865 Pectin lyase-like superfamily protein
30.1496 Ahg904884 RNA-binding protein
30.6594 Ahg319046 Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain
31.1769 Ahg942300
31.8748 Ahg331706 oligopeptide transporter 9
33.1662 Ahg490172 Ubiquitin-like superfamily protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression