Detail



ID : Ahg496428

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|496428|fgenesh2_kg.8__2244__AT5G62500.1
Sequence
TCTCTAACCT TCGATTCTCC GTCCTTTTCT CTGCTCTTCA GTTTTCTCTT CCTAACAAGC AAAACCCCCA AAACAGATCG AATCCATTTT TTTCCTTAAA GAAACTTAAA AAGAAAATTC CTTTTTTTTT TTTTTTTTCT TTCACCTAAC CAAATTGATT CTCTTACCTT TTATCACATT GCTGCATCTG GGTTTTCAAT AGAAACAACA ACAAACAAAA AAAAAAAATG GCGACGAACA TTGGGATGAT GGATAGTGCT TACTTTGTTG GAAGGAACGA GATTCTCAGT TGGATCAATG ACCGCCTTCA TCTCAATCTC TCTCGTATCG AAGAGGCTGC ATCGGGTGCT GTGCAATGTC AAATGTTGGA CATGACCTTT CCAGGAGTTG TGCCAATGCA CAAGGTTAAC TTTGATGCAA AGAACGAGTA CGAAATGATA CAAAACTACA AGGTTATGCA AGAAGTCTTC ACCAAATTGA AAATTACAAA GCCATTGGAA GTCAACAGGC TTGTCAAAGG CCGACCACTA GACAATTTGG AGTTTCTACA ATGGCTGAAA CGATTTTGCG ATTCCATAAA TGGTGGCATT ATGAACGAGA ATTATAATCC AGTAGAACGA AGATCAAGAG GTGGCAGAGA GAAAAGCGTA AAGGGATCTA GTAAGATCTC AAAGTCATTG CAAACAAACA ATATGCATCA TCCTCCAGTC ACTACTTCCA ACAAACCACC TGGTCCCAAG CAAGCAAAAT CACATGCAAT TGGAGGTGGA AGCAACACAT CAGCCGAAGT GCAAGCTCTG TCAAAAGAGG TAGCAGATCT CAAGGTCTCG GTTGATCTCT TGGAAAAAGA AAGAGATTTT TACTTCTCTA AGCTCCGGGA TATAGAGATA CTATGTCAGA CTCCTGAACT TGATGATCTT CCGATAGTGG TAGCGGTTAA GAAGATATTA TACGCAACCG ATGCAGATGA ATCTGTGCTA GAAGAAGCTC AAGAGTGCCT AAACCAGTCT CTAGGGCTTG AGGTTGATGA AGAAGAAGGA AAAGAAGAGG AAGAAGAAGA AGAAGAAGAA GCAGCAGCAG AGACCCAAAC TTAAAGTTGT GACAAATAAA AGTAGAGGAC AACGATGGTT CATTGCCTTG TATTAGAAGA TAGATCACTT GGAGAGGGTG TTTGCACAAT ATTCAATTTA CCCTAACCGG CTTTTTGGTT TTAAAGTGAA CTGAACCGAA TTTGCTCCTT CCTAAATTTG AAAGATTATA TGATGGGTTT TCACTGTATC ACAA 
Length1284
Protein Sequence
Protein Residue
Map Locationscaffold_8: 19276591.. 19279243
Download Sequence
A.thaliana
AGI-codeAT5G62500.1
Descriptionend binding protein 1B
TAIR curator summaryencodes a homolog of animal microtubule-end-binding protein. There are two other members of this family. EB1 forms foci at regions where the minus ends of microtubules are gathered during mitosis and early cytokinesis.
Alias[ATEB1][ATEB1B][EB1B][END BINDING PROTEIN 1B][end binding protein 1B]
Gene coexpression
MR
MR Locus Description
18.0831 Ahg335111 ATP binding microtubule motor family protein
20.6155 Ahg489527 Galactose oxidase/kelch repeat superfamily protein
23.3452 Ahg490341 glycosyl hydrolase 9B13
23.4094 Ahg920074
36.5513 Ahg485694 Pectin lyase-like superfamily protein
60.2495 Ahg487165 Glutaredoxin family protein
62.9206 Ahg480195 ARM repeat superfamily protein
68.6877 Ahg916961 basic helix-loop-helix (bHLH) DNA-binding superfamily protein
69.0652 Ahg494182 Zinc-binding dehydrogenase family protein
76.909 Ahg487032 NAD(P)-binding Rossmann-fold superfamily protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression