Detail



ID : Ahg496634

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|496634|fgenesh2_kg.8__2450__AT5G64320.1
Sequence
AATGTGGCGT TTATGGTTAT GCTAGCGAGA TCAAAGCTTG CTCTAGATGT GAGCAGAAGA TCACATTCTT TGCATAGAAT CTCCTATTGC GCGATTAGCT CCTCTGGATT TTGCGGCAGC GGCGGAGATG ATGGCGGCGG CTCACCGGAT TCATCCAACG AATGGGAGAA GCTTCTTAAA CCATTCGATC TCGATTCTCT CAGGAATTCA TTTCATAAGA TAACTCCTTT TCAGCTCTGT AAGCTACTTG AGTTACCTCT CGATGTTTCT ACTTCAATGG AGTTGTTCTC ATGGACCGGT TCTCAAAAGG GTTATCGTCA CTCCTTCGAT GTGTATCAAG TTCTTATAGG TAAACTTGGT TCGAATGGTG AGTTTAAGAC CATTGATAGA TTGCTAATGC AGATGAAAGA TGAAGGAATC GTTTTTAAAG AATCTCTTTT CATTTCGATA ATGAGAGATT ACGACAAAGC TGGGTTTCCT GGACAAACTA CGAGGTTGAT GTTGGAGATG AGGAATGTGT ATTCCTGTGA ACCCACTTTC AAATCTTACA ATGTTGTCTT GGAGATTTTG GTTTCTGGTA ATTGTCACAA AGTTGCAGCT AATGTGTTCT ACGATATGCT TAGCCGAAAA ATCCCTCCAA CGCTTTTCAC ATTTGGTGTT GTGATGAAAG CTCTTTGTGC GGTTAATGAG GTAGATTCGG CTCTGTCTGT GCTTAGGGAC ATGACGAAAC ATGGCTGTGT CCCAAACTCT GTCATTTACC AGACTCTTAT ACACTCGTTA TCTAAGTGTA ATAGAGTGAA CGAAGCGCTT CAACTTTTAG AGGAGATGTT TCTCATGGGA TGTGTTCCTG ATGCTGAGAC GTTCAACGAT GTTATCCTTG GTCTCTGTAA GTTTGATCGG ATTAACGAAG CTGCTAAAAT GGTGAACCGG ATGCTTATTA GAGGATTTAC TCCTGATGAT ATTACTTATG GGTATTTGAT GAATGGTCTG TGTAAGATTG GCCGGGTTGA TGCTGCAAAG GATCTTTTTT ACAGAATTCC GAAACCGACA AGTGTGATCT TCAACACTCT TATTCACGGG TTTGTGACTC ATGGAAGACT TGATGATGCT AAAGCTGTCT TATCAGATAT GGTCACGTCT TATGGCATCG TTCCTGATGT CTGCACATAT AACTCACTGA TCTATGGATA TTGGAAGAAG GGTCTTGTTG GTTTAGCTCT GGAAATTCTT CGCGACATGA GGAATAAGGG ATGTAAGCCT AACGTCTACT CTTATACTAT TTTAGTTGAT GGTTTCTGTA AATTAGGAAA GATAGATGAA GCCTACAATC TTCTGAATGA AATGTCTGCC GATGGACTGA AACCCAACAC TGTTGGTTTT AACTGTTTGA TATCGGCTTT CTGCAAGGAA CACAGAATCC CCGAGGCCGT AGAGATTTTC AGAGAGATGC CGAGAAAAGG CTGTAAACCC GATGTGTATA CATTTAATTC GTTGATATCT GGGCTCTGTG AGGTCGACGA AATAAAGCAT GCCTTATGGT TACTTAGAGA CATGATATCA GAAGGTGTTG TTGCCAATAC TGTTACTTAC AACACGCTGA TCAATGCGTT TCTTAGAAGA GGTGAAATCA AAGAAGCTCG TAAACTAGTA AACGAGATGG TTTTCCAGGG ATCCCTGCTC GATGAGATAA CCTACAATAG TCTGATAAAA GGGCTGTGCA GGGCTGGGGA GGTAGATAAA GCGAGAAGCT TGTTTGAAAA GATGTTAAGA GACGGGCTTG TACCGAGCAG CATCTCCTGC AACATACTTA TAAACGGGCT CTGCAGAAGC GGGATGGTGG AAGAAGCGGT TGAATTTCAG AAAGAGATGG TTCTGAGAGG ATCGACACCA GACATTGTGA CATTTAACAG TCTGATAAAC GGTCTGTGTA GGGCCGGTAG GATCGAAGAT GGTTTGACAA TGTTTAGGAA GCTTCAGGCT GAAGGAATAC CTCCTGATAC GGTAACGTAT AACACTCTGA TGAGTTGGTT GTGCAAAGGA GGTTTTGTTT ATGATGCTTG CTTACTTCTG GATGAAGGTA TTGAAGATGG TTTTGTTCCA AATGATAGAA CTTGGTCAAT TTTGTTACAG AGTCTTGTTC CCCAAGAAAC ACTTGATAGA CGAACGTTTT ATAATGCAGT TTTCTGAAAC T 
Length2191
Protein Sequence
Protein Residue
Map Locationscaffold_8: 20128563.. 20130753
Download Sequence
A.thaliana
AGI-codeAT5G64320.1
DescriptionPentatricopeptide repeat (PPR) superfamily protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
9.48683 Ahg919120 cobalt ion binding
24.6577 Ahg336372
39.4968 Ahg318761 titan9
45.4753 Ahg922906
54.4518 Ahg898458 Cleavage and polyadenylation specificity factor (CPSF) A subunit protein
60.1581 Ahg478332 sequence-specific DNA binding transcription factors
63.2614 Ahg494624 Pentatricopeptide repeat (PPR) superfamily protein
74.5989 Ahg922589 Bromodomain transcription factor
78.6893 Ahg495966 TBP-associated factor 15B
80.05 Ahg941057 DNA/RNA polymerases superfamily protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression