Detail



ID : Ahg496810

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|496810|fgenesh2_kg.8__2626__AT5G65740.2
Sequence
ATGATGAAGG GTTCTGGAGA ATGTATAGGA CGTGAAAGAT GCGAGGAATT AGCAAAGTCT TCTTCTTTTT ACCGGAAAGT TTACTCGGAG ATAGAGGAAA TTGGATGGGA ACCGCTAAGG AGATTAGGTG GAGATTTAAC GTTTTTCAGC TTTCAGATTT TAGATAAGAA GGGAAGAGCA CACAACTTAG AATTTCAACT GAACAGAGAC TATCCTAATT CCCCACCTTG TGTTTCTGCG GATGTGCCAT ATATGTTTAC TTTAGAATGG TCAACAAGTT CAAGGTTGAA GGATGTGATG TACCAATTCC AAAAGCATTT GGACTATCTT CAAGAATTTT GGTCTGTCTT GGACGATATC GATAAATCTC TCTGTGTTGT TGATGCCAAA CAACCATCTC GCGCCTCCGC TATCCGCCGG ATTCATGCTG GGAATGATTG CATCATCATT GTTCATATCG ACTTGAAAGA CCCTAAATCC CTACCAGAAT GCCGGTTTAT TGGTCCTGTG CCTCCAGCTA CGCATATGAA CATCTTACAT ATGTTATGGA GAAGAAATAG CAAAAAATGG TCAAAGGAAA GACCATTTCC TGAAAACCTC GAATGTATTC TAGGTACTGA GCTTCCAAAG CCTCTAGGTC TCCAAGAGGA AGACAATCAA CAACAAGTTG AATGTGGAAT TTGCTATGCG CAGTTTCTAC CCACCGATGA GGAGCTCGGA GCTAGAAGTG GGACGCGAAC AGATTACACA TGTGAGAACA TCAGTTGCAA CAAGTCTTTC CATAGCCTTT GCCTCACAGA CTGGTTAAGG TCTATCACAA CAACAAGACA GTCATTTGAT GTTCTGTTTG GGAACTGTCC TTATTGTTCA GACCCAGTGG CAGTCAAAAT CAACAACCAT TTGAAGCCAT ACTTGCTAAT TAGCTGATTC TGAAAGTTCT AATGAAACAT GATACAAAGA GAAGAGTTAG TACAGTGATG AGTAGTAGTA AGTGAGGACA AAAGTTCCTT TTTACTATTT TTCTTCTGTA CGTTTAAGAT AAGACCCATG TAGCTTTCAA ATAAGAAAGG TGAATGTACC TTCTTTTTTC CTTTGTGGTC ACTCAATCCC AAAGCTGATC TATCAATCAC CATCAATGTG GAGTTTCAAG CAATAATAAC TCTTTTACTT GGTAATTTTG AAAAAGAGTA TTTGAATGCT ATTATTTGAA TCCTTTCTCT CCAGCTGTAG TAGTACTGTC GGTGGCTAA 
Length1249
Protein Sequence
Protein Residue
Map Locationscaffold_8: 20790948.. 20793029
Download Sequence
A.thaliana
AGI-codeAT5G65740.2
Descriptionzinc ion binding
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
7.93725 Ahg488606 Spc97 / Spc98 family of spindle pole body (SBP) component
16.7631 Ahg929675 nuclear RNA polymerase D2B
17.4356 Ahg482359 Alba DNA/RNA-binding protein
24.7992 Ahg490904 RNA-binding (RRM/RBD/RNP motifs) family protein
29.8998 Ahg491633 SHK1 binding protein 1
38.1051 Ahg323570 voltage dependent anion channel 5
42.9884 Ahg488891 Domain of unknown function (DUF1767)
49.8397 Ahg475859 PLAT/LH2 domain-containing lipoxygenase family protein
53.1789 Ahg919413 RNA-binding (RRM/RBD/RNP motifs) family protein
56.6833 Ahg496095 Tetratricopeptide repeat (TPR)-like superfamily protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression