| Annotation |
|---|
| Description | jgi|Araly1|496876|fgenesh2_kg.8__2692__AT5G67230.1 |
| Sequence |
AGAAGGAAGA AGAAGAAGAA GAAGATGAAG CTCTCTGTGT TTCGATTGAG CTATTGGAAC CGTCGAGGAA GCAGTTTCCG ATCATCGCCT TCGTTGGATC CCACATTCGA CGGCAAATCT CCGTCGTCTG TGTTTTGGTT CGTCATTCAT GGTCTCTGCT GCTTGATCAG CTTGATTTTA GGGTTCCGAT TCAGCCATTT AGTACTCTTC TTCCTCTTCT CGACTTCCGT CACCAATCTA TACACAACGC CTTTTCTCTC CGCCGGAAGC GGCGGTGTAA GCCAGCTTCT CCGGCTAAAA CCTCTAGAAA CAGCAACTAA CAGCACGGTG AAGAAGAACT CTCGAGTGGT GGTTGGAAGA CACGGGATCC GGATCCGTCC ATGGCCTCAC CCGAATCCGA TTGAGGTCTT GAGAGCTCAT CAGTTGCTTG TGAGAGTACA GAAAGAGCAG AAATCGATGT ACGGTGTGAG GAGCCCTAAG ACTGTGATTG TGGTGACGCC GACTTATGTA CGGACTTTCC AGGCGCTTCA TTTGACCGGA GTTATGCACT CGCTTATGCT TGTTCCTTAC GATTTGGTTT GGATCGTTGT GGAAGCTGGT GGAATCACCA ACGAGACTGC TTCGTTTATC GCAAAATCAG GATTGAAGAC GATTCACTTA GGATTCGATC AGAAAATGCC TAATACTTGG GAAGATCGTC ACAAATTGGA GACCAAAATG AGACTTCACG CCTTGAGAAT CGTGAGAGAG AAGAAGTTAG ATGGGATTCT TATGTTTGCT GATGATAGCA ATATGCATAA TGAATTATCG TCGGTCTTGA AGAAAGAAGA AGGGAAGCGT AAAGAGAAAC CTTCAATGCC AATCCAAGGT CCTAGTTGTA ATTCCTCTGA GAAATTAGTG GGCTGGCACA TTTTCAACAC TCAACCTTAT GCCAAGAAGA CTGCGGTTTA TATCGATGAG AAAGCGGCTG TGATGCCTAT TAAGATGGAA TGGTCAGGGT TTGTGTTGAA TTCTAGGTTG CTTTGGAAGG AATCTGTAGA TGAGAAACCG GCATGGATTA AAGATCTCAG CTTGTTGGAT GATAACGAGG AAATTGACAG TCCATTATCT CTGGTCAAGG ATCCTTCCAT GCTGGAGCCA CTTGGAAGCT GTGGCCGCCG TGTCTTGCTT TGGTGGCTTC GTGTTGAAGC TCGAGCTGAT AGCAAATTCC CACCTGGCTG GATCATAAAG TCGCCTTTGG AAATCACAGT ACCATCAAAG CGGACACCTT GGCCAGACTC TTCCTCAGAG CTCCCAGCGG CGATCAAAGA AGCAAAAAGC GACACTAAGC CAAGAGGATC AAATAGCAAG AGCTCGAAAG GGAAACAAGA ACCGAAAGCT TTCAATGGTG TCAAAGTATC AACAACTAGT TGAAGAAGCT TCTATAAATA GATCGAGTTT CATTTCATAT TCTTTTTCAC AGTATATATC GGAAAATTGT TTGGTGTGCA TTAGCTTCAT TGTATACAAT ACAAAAATCA TATGGGATGT TTTGATTTCT TCAAATCGAT ACTTAGCTCT |
| Length | 1560 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_8: 21056465.. 21058323 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT5G67230.1 |
| Description | Nucleotide-diphospho-sugar transferases superfamily protein |
| TAIR curator summary | Encodes a member of the GT43 family glycosyltransferases involved in glucuronoxylan biosynthesis: AT2G37090 (IRX9) and AT1G27600 (IRX9-L or I9H, IRX9 homolog); AT4G36890 (IRX14) and AT5G67230 (IRX14-L or I14H, IRX14 homolog). They form two functionally non-redundant groups essential for the normal elongation of glucuronoxylan backbone. I9H functions redundantly with IRX9, I14H is redundant with IRX14. IRX9 or I9H do not complement IRX14, IRX14 or I14H do not complement IRX9. |
| Alias | [I14H][IRX14-L][IRREGULAR XYLEM 14 Homolog][IRREGULAR XYLEM 14-LIKE] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 9 |
Ahg474546 | E3 Ubiquitin ligase family protein |
| 9.48683 |
Ahg318665 | SWIB complex BAF60b domain-containing protein |
| 25.0998 |
Ahg478976 | Plasma-membrane choline transporter family protein |
| 31.305 |
Ahg487615 | conserved peptide upstream open reading frame 16 |
| 36.4692 |
Ahg471734 | SNARE-like superfamily protein |
| 40.1248 |
Ahg920975 | SKP1-like 3 |
| 42.1426 |
Ahg496743 | ENTH/VHS family protein |
| 43.8862 |
Ahg940041 | DnaJ domain ;Myb-like DNA-binding domain |
| 51.9326 |
Ahg496787 | Protein kinase superfamily protein |
| 52.0961 |
Ahg472236 | |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
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