Detail



ID : Ahg496939

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|496939|fgenesh2_kg.8__2755__AT5G66640.1
Sequence
CCTGCTTCAA ACATGATCCA TCTAAGGATC CTTTAAATAC CGCCTTGGAA ATTTCACGGT ATGAAGAAGA AGATCGCATG GTACGCCGGA AAATACAAGA AGAGGCTGAA AAGATTGAGA TTGAAAGGGT AAAGGAAGAA AGTCTGAAGC AAGCTAAGCA GGAGGAGGAA AAGAGAAGAT CAGAAGAGTT GAACAAGGAG CAAGGCAAAA GAAAGCAAGA GAACGATGAT CAGCTTTCAA ACACTTCTAA AGATAAGGGA CAAATCATTC ATTCCAAAGA TGATGTGGAA AAAGTTGTGA ATCCTCCTCC TAGAATTGAT GGAAAATCTG TGATTGAAGA TGGAATTTCT GTCAATCCTC GATCTTTATG TTGCTTTCAT TGCCACAGAC CATTTGCTCT GCACGAGATT TTAAAGAAGG GAAGGTTTCA CATAGATTGC TACAAAGAGT ACCGTAATCG CAACTGCTAT GTCTGCCAAC AAAAGATTCC TTTTAATACG GAAGGTATAA GAGAGTACAA TGAGCATTCG TTCTGGAAGG AGAAATACTG TCCTCGTCAT GACGATGATG GAACTGCCAA GTGTTGCAGC TGTGAAAGAT TAGAGCCTAG GGGAACGAAC TATGTAATGC TTGGTGACTT TCGGTGGCTA TGTCTAGAAT GTATGGGATC AGCGGTTATG GATACTAACG AAGTCCAGCC TTTGCACTTT GAAATCCGTG AATTCTTCGA AGGCTTGTTC TTCAAGGTTG ACAAAGAATT TTCTCTTCTT CTTGTTGAGA AACAAGCGCT GAATAAAGCT GAGGAAGAGG AGAAGATTGA CTACCATCGT GCAGCCGTAA CCAGAGGTCT TTGCATGTCT GAAGAGCAAA TTGTCCCAAG TATAATAAAG GGGCCAAGGA TGGGGCCGGA CAATCAGCTA ATAACAGACA TAGTTACAGA GTCTCAAAAA GTGAGTGGCT GCGAGGTTAC TGGGATTCTC ATCATATATG GACTTCCTAG GTTATTAACA GGATATATCT TGGCTCACGA GATGATGCAT GCTTGGCTTC GACTCAATGG TTATAGGAAT CTTAAGTTAG AGTTTGAAGA AGGATTGTGC CAAGCGTTAG GCCTCAGGTG GTTGGAGTCT CAGACATTTG CATCTACTGA TGCTGCTGCT TCTGTCGCTT CTTCTTCTTC TTCCCCTGCT CCTCCAGCGG CTACCACGTC AAAGAAAAGC AGTGACGACT GGTCTATTTT CGAGAAGAAG CTCGTAGAGT TTTGCATGAA TCAGATCAAA GAAGATGATT CACCGGTCTA CGGTCTCGGA TTCAAACAAG TTTACGAGAT GATGGTCTCA AATAACTACA GCATTAAGGA TACCCTTAAA GAGATCGTTA GCGCTTCCAA TACTACACCA GATTCAACGT TTTGAATCAG CC 
Length1422
Protein Sequence
Protein Residue
Map Locationscaffold_8: 21319783.. 21321952
Download Sequence
A.thaliana
AGI-codeAT5G66640.2
DescriptionDA1-related protein 3
TAIR curator summary
Alias[DAR3][DA1-related protein 3]
Gene coexpression
MR
MR Locus Description
10.6301 Ahg490488 TRAF-like family protein
14.0712 Ahg492886 phloem protein 2-A1
15.4919 Ahg926057
19.4422 Ahg927551 aspartate kinase 3
21 Ahg479487 Leucine-rich repeat protein kinase family protein
23.0868 Ahg489922 oligopeptide transporter 7
25.5147 Ahg482229 TRAF-like family protein
29.5804 Ahg929332 metallothionein 3
30 Ahg480557 ubiquitin-conjugating enzyme 29
30.8545 Ahg493510 Rapid alkalinization factor (RALF) family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression