Detail



ID : Ahg888142

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|888142|Al_scaffold_0007_128
Sequence
ATGTACGTTG TGAAGCGTGA CGGTAAGCAG GAAACTGTTC ACTTCGACAA AATCACTGCG CGCCTAAAGA AACTTAGCTA TGGGCTTAGT ATCGATCACT GTGACCCTGT CCTTGTCGCT CAGAAAGTCT GTGCCGGTGT CTACAAAGGC GTCACGACGA GTCAACTCGA TGAGTTAGCC GCCGAGACCG CTGCTGCTAT GACGGCCAAT CATCCTGATT ACGCTTCCCT TGCGGCTAGG ATTGCTGTAT CCAATCTGCA TAAGAACACT AAGAAATCAT TTTCTGAAAC GGTTAGAGAC ATGTACAGTC ATGTCAATGA GAGATCTGGA CTCGCTTCTC CTCTAATTGC TGCTGATGTA TACGAGATAA TTATGAAGCA TGCTACTCGT CTGGACAGTG AAATCATCTA TGATCGCGAT TTTGAATATG ATTACTTTGG ATTTAAAACG CTTGAGAGAT CATACCTCTT AAAAGTGCAA GGCAAAGTGG TTGAAAGGCC TCAACACATG CTGATGAGGG TTTCTGTTGG CATCCACAAG GAAGATATCG ATTCCGCTAT CAAAACTTAC CATTTAATGT CTCAGCGATG GTTCACTCAT GCATCTCCTA CTCTCTTCAA CTCAGGAACC CCAAGGGCTC AATTAAGCAG CTGCTTTCTG ATCTGCATGA AGGATGATAG CATCGAGGGG ATATATGACA CATTGAAAGA GTGTGCTGTT ATAAGCAAAT CGGCTGGGGG CATTGGTGTT TCAGTTCACA ACATCCGTGC AACTGGAAGC TACATTCGTG GTACCAATGG AGCATCTAAT GGTATTGTTC CAATGCTGAG GGTGTTCAAT GATACTGCTC GTTATGTTGA CCAAGGAGGA GGCAAGAGAA AAGGTGCCTT TGCCGTATAT CTGGAGCCCT GGCATGCTGA CATTTTTGAC TTTCTGGAAC TCCGAAAGAA TCATGGAAAG GAGGAACACA GGGCTAGAGA CTTGTTTTAT GGTCTTTGGA TACCCGATCT TTTCATGGAG AGGGTTCAGA CTGATGGGCA GTGGTCACTG TTTTGTCCTA ATGAAGCTCC AGGTTTGGCA GATTGTTGGG GTGCAGAGTT CGAGAGATTG TACACTCAGT ACGAGAATCA GGGGAAGGCC AAGAAGGTTG TCCAGGCACA GCAGCTTTGG TACGAAATCT TGACATCCCA AGTAGAAACA GGGACACCAT ACATGCTTTT CAAGGATTCA TGTAACAGGA AAAGCAATCA ACAAAATCTG GGTACCATCA AGTCTTCCAA TTTATGCACC GAAATCCTTG AATACACAAG TCCAACAGAA ACGGCTGTGT GTAATCTTGC ATCTATTGCT TTACCCCGGT TTGTAAGGGA GAATGACATC CCCTTGGACT CACATCCGTC TAAGATTGTA GGCAGTTTGG GCTCAAAGAA TCGTTACTTT GATTTCGACA AGTTAGCAGA GGTGACTGCC ACAGTGACTG TTAATCTTAA CAAGATTATA GATGTGAATC ATTATCCAGT GGAGACAGCA AAAACCTCAA ACATGCGACA TAGGCCTATC GGTATTGGTG TACAAGGTCT TGCAGATGCA TTTATCCTTC TCGGAATGCC ATTTGATTCC CCTGAGTCTC AACAACTGAA CAAAGACATA TTTGAAACCA TATACTACCA TGCACTCAAG TCATCTTCAG AGATTGCTAC TAAGGAGGGT ACATATGAAA CTTACCAAGG AAGTCCTGTG AGTAAGGGAA TTCTTCAACC TGATATGTGG AACGTAATTC CATCTGACCG CTGGGACTGG GCTGCTCTCA GGGATATGAT TTCAAAGAAT GGAATCAGAA ATTCTCTTCT GGTGGCACCA ATGCCTACTG CTTCAACCAG CCAGATTCTT GGGAACAATG AATGTTTTGA ACCTTATACC TCAAACATTT ACAGTCGTAG AGTCTTAAGT GGTGAATTCG TAGTAGTGAA CAAGCATCTT CTTCATGACC TGACTGATAT GGGACTCTGG TCTCCTACAC TGAAAAACAA GATAATACAT GAGAATGGTT CTATCGTGAA TGTCAAGGAG ATACCTGACG ACTTGAAAGC GATTTACAGG ACTGTCTGGG AGATTAAGCA GAGAACAGTG GTTGACATGG CCGCCGATCG TGGATGCTTT ATAGATCAAA GCCAAAGTTT GAATATACAC ATGGAAAAGC CAAACTTTGC AAAACTCACT TCTTTACACT TCTACGCTTG GAAAAAGGGT TTGAAAACGG GAATGTACTA CCTGCGATCA CGTGCTGCAG CCGATGCGAT AAAGTTCACA GTAGACACAG CAATGCTAAC GGAGAAGCCT AATGTAACTG AGGACGAAGA AGCAACAGAA GAAGACAACG AGACAAAGAT GGGCACAGAT GGTTTGCTCT TTGACAAACC GTGA 
Length2424
Protein Sequence
Protein Residue
Map Locationscaffold_7: 466390.. 470386
Download Sequence
A.thaliana
AGI-codeAT2G21790.1
Descriptionribonucleotide reductase 1
TAIR curator summaryencodes large subunit of ribonucleotide reductase involved in the production of deoxyribonucleoside triphosphates (dNTPs) for DNA replication and repair
Alias[ATRNR1][CLS8][DPD2][R1][RNR1][RIBONUCLEOTIDE REDUCTASE LARGE SUBUNIT 1][CRINKLY LEAVES 8][defective in pollen organelle DNA degradation 2][RIBONUCLEOTIDE REDUCTASE 1][ribonucleotide reductase 1]
Gene coexpression
MR
MR Locus Description
26.4008 Ahg331330 methyltransferase 1
38.6264 Ahg315978 chromomethylase 3
40.6202 Ahg911567 Ribosomal protein L14p/L23e family protein
46.744 Ahg945124 glycine-rich protein
58.1206 Ahg934367 Ribosomal protein L11 family protein
61.0819 Ahg489149 FRA8 homolog
61.7171 Ahg921665 Eukaryotic aspartyl protease family protein
64.2495 Ahg927425 chromomethylase 1
67.7643 Ahg471757 CYCLIN A2;3
71.7774 Ahg936082 expansin A15
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression