Detail



ID : Ahg888289

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|888289|Al_scaffold_0007_275
Sequence
ATGGAGGCCA AGAGCAAGAA AGCAGGAGCC TCTCGTCTAT GCTGCTTATG CTTCAAGAGG CAATTTTTCT TTCTTCTCTT TTTGCCTAGA ATCTCGTGTT TTTGGGTTTT AGCTAAGATT TTAAGCTGTA CTATATACAG AGAGTGCTTC TATGAGGTTT TTGAGGAGGA GACTCATCAA GTCATTGTTC AGAATGAATG TTATATAGCG TTTTATTCAT TTGATGGGTT CTTTATTTTT CTTTTCCAGT ATGGTTTGCC TCGTCAGATT GTTTCATACA AAGATATGTA TGGATGGACA ATGGACGACA TTGTGAAAAT GATCGGTTCG AAGAACAATT GCACCTTTTT GTGGTGTATT CCGTCTACAG CGTTATTGAA AGTAGATAAG CTAGTCGCTG GACATAATGC AGATGATATA GCAGAAACCG TTCTCTTGAA CATATTGCGA GGGGATATTG CTTTAAGTCG GTGCACATCG ATTACTACTG GTGAAGATGG TCCCATTCCA AGATGTAAAC CTTTCAAGTA TACGACGAAA AAGGAT 
Length546
Protein Sequence
Protein Residue
Map Locationscaffold_7: 1089315.. 1090266
Download Sequence
A.thaliana
AGI-codeAT2G44270.2
Descriptionrepressor of lrx1
TAIR curator summaryEncodes ROL5, a repressor of lrx1 mutants that develop aberrant root hairs. ROL5 is a homolog of yeast Ncs6p that affects TOR signaling. The target of rapamycin (TOR) pathway is a major regulator of cell growth in eukaryotes, and inhibition of this pathway by rapamycin reduces cell growth. ROL5 might function as a mitochondrial component of the TOR pathway that influences the plant's response to ROS (reactive oxygen species).
Alias[ROL5][repressor of lrx1]
Gene coexpression
MR
MR Locus Description
10.6771 Ahg907969
13.8564 Ahg333050
17.0294 Ahg931073 Basic-leucine zipper (bZIP) transcription factor family protein
23.6854 Ahg943461
26.2298 Ahg951834 IBR domain-containing protein
30.2985 Virus3808
33.4365 Ahg490748
40.8656 Ahg890711
42.3202 Ahg934346
47.7179 Ahg936269 Terpenoid cyclases/Protein prenyltransferases superfamily protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression