Detail



ID : Ahg951834

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|951834|scaffold_20300003.1
Sequence
TTGTCATTTT CAAGAAAACG ATGGAGCACG ATCGAGGGAA ACCCTACTCT GTTCTAACGA GAAATGAAAT TAGCGTAAAG ATGAAGAAAC AGATCAATGA AATCTCTGAC ATCTTCTGCA TATCAAAATC CGATGCGACC GTACTTCTTA TGTATCTCCG ATGGGATTCG CTTCGTGTTT CAGAGTTTGG AATCAGTTGT GATTGATCCC AATCCTGATT CATCTA 
Length226
Protein Sequence
Protein Residue
Map Locationscaffold_203: 12377.. 12643
Download Sequence
A.thaliana
AGI-codeAT5G63730.1
DescriptionIBR domain-containing protein
TAIR curator summaryEncodes ARIADNE14 (ARI14), a putative ubiquitin E3 ligase. ARI14 and an inversely transcribed gene KPL generate a sperm-specific natural cis-antisense siRNA pair. In the absence of KPL, ARI14 RNA levels in sperm are increased and fertilization is impaired.
Alias[ARI14][ATARI14][ARIADNE 14][ARABIDOPSIS ARIADNE 14]
Gene coexpression
MR
MR Locus Description
4.89898 Ahg916358 low-molecular-weight cysteine-rich 1
8.3666 Ahg915446
8.48528 Ahg333050
12.8452 Ahg331180 Defensin-like (DEFL) family protein
20.0749 Ahg894726
20.9762 Ahg931098 Protein of unknown function (DUF1336)
26.096 Ahg493824 Lactoylglutathione lyase / glyoxalase I family protein
26.2298 Ahg888289 repressor of lrx1
26.2679 Ahg357284
28.931 Ahg950211
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression