Detail



ID : Ahg888917

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|888917|Al_scaffold_0007_903
Sequence
ATGTTTTGTC GAAACGTCTC GGTGAGGCGG AAGAAGAAAT CTGGTTCGGT TCCGGTTTAT CTGAATGTGT ACGATCTTAC CCCAATGAAT GTTTATGGTT ACTGGCTCGG AATTGGGATC TATCACTCTG GTCTTGAAGT TCATGGGGTT GAATATGGAT ACGGGGCACA CGAGCATTCG AGCTCGGGAA TCTTTGAAGT TGAGCCAAAG AAGTGTCCTG GTTTCACGTT CAGGAAATCG ATTCTTGTGG GTGAAACAGA GATGAGGGCT AAAGAAGTTA GAACCTTTAT GGAGAAATTA TCAGAAGAGT ATCAGGGAAA CAAATACCAT CTCATCACAA GGAACTGCAA CCATTTCTGC AACCATGTTT GTTTGAAACT AACTCAAAAC TCAATCCCTA GTTGGGTCAA CCGTCTTGCT CGCTTAGGTT TCCTCTGCAA CTGTGTGTTG CCGGCTTGCT TGAACGAGAC TAAAGTGAAG AGGGTAGGAA AAGACGGGAA GCTCTTGGAA GGAGAAAGTA AGAAGAAGAG AAAGAAGAAG AAAGCGAGAA GCCGATCAGG TCCGTTATCT TCGTCTTCTT CAAATTCAAG GTTAGATAAT AATCCTACAC ATAACAGATC AAAATCAACG GGTAATCCTC CTCTTTCTTC TTCTCCGTCT TGTCCAATGA GACCTCGAGT TCCTTGTGTT GCATCTGGAG CTCAAGATCA GAAGCCTCCA AGCCATATTA ATAATGCCAG CTTCTGCAGT GAAGTGCAAT GTCACGTGCT TTGCTTTGCA TATGAGAGGA TGAATCAGAA TGAAGGTGAC GCCCTTGTAG ATTCCATCAA AGCAAAGTTA GACTTTTTGT CATCTCTTTC AACCAAATGC TGTATATACA AGGTACCTAA TAAGCTCCGT AGACTCAATC CTGATGCATA TACGCCTCGG CTTGTGTCTT TTGGCCCGCT ACATCGTGGT AAAGAAGAGC TTCAAGCTAT GGAAGATCAT AAATACAGGT ATTTGCAGAG TTTTATCCCT AGAACAAACT CTAGTCTAGA GGACCTTGTT AGAGTTGCTA GGACTTGGGA ACAAAATGCT CGCAGCTGTT ACGCAGAAGA TGTGAAACTT AATAGCGATG AGTTTGTTAT GATGTTAGTT GTAGATGGTA GCTTCCTGGT TGAACTTCTT TTGAGGTCTC ATTATCCTCG GCTTAGAGGC GAGAATGATC GGATATTTGG GAATTCAATG ATTATCACTG ACGTGTGCCG TGACATGATT TTGATCGAAA ATCAGTTACC CTTTTTCGTT CTAAAGGAGA TATTTCTTCT CTTGTTTATA TACTACCAAC AAGGAACACC TTCAATCACA CAGCTAGCGC AACGCCACTT CAGTTATTTC TTGAGCCGCA TTGATGATGA GAAGTTTATT TCAGAGCCAG AACATTTTGT TGATCTTCTG AGGTCTTGTT ATCTGCCACT GGTTCCAATT AGATTGGAAT ACACTACATT GAAAGTGGAC AATGCACCTG AAGCAACAGA GCTTCACACT GCTGGTGTTA GGTTCAAGCC AGCAGAGAGC ACTAGTTGTT TACTTGACAT TAGTTTTGCT GATGGAGTAC TGAAGATTCC AACCATTGTC GTCGATGATC TCACGGAGTC CCTCTACAGA AACATCATTG TGTATGAACA ATGTCATTGC TCAAATAAGA ACTTCCTCCA CTACACCACA CTGCTCGGTT GCTTCATTAA ATCCCCTACA GATGCTGACT TGCTCATCCG CAGTGGGATC ATCGTGAACC ATCTGGGGAA CTCAGTAGAT GTTTCGAAGT TGTTCAATAG CATCAGCAAA GAGGTTATCT ATGACAGAAG ATTCTACTTT TCGACACTCT CTGAGAACCT TCAAGCTTAC TGCAACACAC CATGGAATAG GTGGAAGGCA ATTCTGAGAC GTGACTACTT CCACAATCCT TGGTCAGTTG CTTCTGTGTT TGCTGCTTTA CTTCTTCTCC TTCTCGCTTT CATTCAGGCT GTATGCTCTA TCTTGGCTTT GTAA 
Length2034
Protein Sequence
Protein Residue
A.thaliana
AGI-codeAT4G31980.1
Description
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
16.3707 Ahg481109 phosphofructokinase 5
16.6433 Ahg490885 cytochrome P450, family 81, subfamily D, polypeptide 8
20.4939 Ahg493454 DNA-directed RNA polymerase II-related
35.9166 Ahg931380 Protein of unknown function (DUF810)
36.4143 Ahg496460 Protein of unknown function (DUF1645)
37.0135 Ahg336505 leucine-rich repeat transmembrane protein kinase family protein
37.47 Ahg470901 RINT-1 / TIP-1 family
38.6135 Ahg943489 Concanavalin A-like lectin protein kinase family protein
38.923 Ahg492476 Pleckstrin homology (PH) domain-containing protein
39.95 Ahg483400 NAC domain containing protein 42
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression