| Annotation |
|---|
| Description | jgi|Araly1|889700|Al_scaffold_0007_1686 |
| Sequence |
ATGGCTAACA AAAACGCAGA ATCATCTTCA CAGCCTCCTC CTCCTCCTCC TCAGGTGCAG CCAAACCAAC AACAGCAGCA ACCGATTGCT AATGAACAAG AGCAGGAGCC TCATGGTGAC ACCTGTAGCA TTCCTCCTGC GCAGTCTGGA AACACAGACT CGCGTTCCCG TGCTGGCAAC ACGGTTTTCA AGAGTGGACC GCTATCTATA TCTTCAAAAG GGATTGGGTG GACATCATGG AAGAAAAGAT GGTTTATTTT GACTCGTACT TCACTGGTTT TCTTTCGAAG TGACCCGAGT GCAGTCCAAC AGAAGGGTAG TGAGGTCAAT TTGACCCTTG GGGGAATTGA TCTTAACAAT TCAGGCAGTG TGGTTGTTAA GGCAGACAAG AAGCTGTTGA CTGTTCTCTT CCCCGATGGT CGTGATGGAC GGGCCTTTAC ACTCAAGGCT GACACTATGG AGGATCTACA CGAGTGGAAA GCTGCTCTGG AAAACGCTCT AACACAAGCA CCTAGTGCTT CCCATGTTAT GGGTCAAAAT GGTATTTTCA GGAATGATCA TGCAGATCCT GCTGTTGGTG TTGATGAAAA GAAAGATGAG ACACCAACAA AATCAACTGT CCTTGGAAGA CCAGTATTAC TTGCTCTAGA AGATGTTGAT GGAGCTCCAT CTTTCTTGGA AAAGGCCCTT AGATTTGTTG AAAATCATGG AGTCAGGATA GAAGGAATTT TGAGACAAGC TGCTGATGTT GATGATGTTG AACACCGGAT TCGCGAATAT GAGAAAGGAA AAAATGAGTT CAGTCCTGAG GAGGATGCGC ATGTTATTGC TGATTGCCTT AAGTATTTTC TCAGAGAGTT GCCTTCCTCT CCAGTGCCTG CATCTTGTTG CAACGCCCTT CTGGAAGCTT GCCGTACTGA CCGTGGCAAT AGGGTCAATG CTATGCGGGC AGCAATCTGT GAATCATTCC CTGAACCAAA TCGTCGCCTA TTGCAAAGAA TCCTGATGAT GATGCAGACT GTAGCCTCTA ACAAAACAGT GAACCGGATG AACACAAACG CCGTTGCAGC TTGTATGGCA CCTTTACTTC TTCGACCCCT TCTGGCTGGT GACTGTGAAA TTGAAAATGA TTTTGATGTC GGCGGTGATG GTTCTATGCA ACTTCTGCAA GCAGCTGCTG CAGCGAATCA TGCCCAGGCT ATAGTGATAA CATTATTAGA AGAATATGAA AGTATATTTG GAGAAGGTTC CTTGTCACCC GGCTTATACT CTGACTCAGA AGAGAGTGGT AGTGGGACAG AGGAGGGATC TGATGATGAA GAGTATGATG ATGACGAAGA TGATGGCACA CAGGGATCTG ATGACTACAC AGATGAGGAA GAGGACCTTG AAAATGAATC TAATGGATCA TACAGTGAGA GTGCCGCCTC AGAAGACAAA TATGCAGACA GCATTGATCC TGACGACCAT AAGGCACGCC CTGAACCAAA ATCCCCAAAA GGAAGTAAGG AGCCTAAGAA GCTTTTATCT GGCTCCAGAC GATCTTCTCT ACCACGACAT GATGACGGTA AAAAGGATGA GGATATTGTG GTTAAGGGAG CTGATAATAC AGAGGTAAAG GATGTTGTAG AGGTCTCGAC AACTGAGGAT AAAGATTCGT CAACATCAGA TGTGGCATCT GACACTCAGA AACCGTCAAA GTTATCCGAT GCACCGGGAG GAAGTAAAAG GCACTGGGGC CGTACCCCTG GGAAGAAAAA CCTGTCAATG GAATCTATTG ATTTCTCAGC GGAAGTGGAC GAGGACAATG CTGACATTGA GCGACTTGAA TCAACCAAAT TAGAGCTGCA AAACAGAATT ACAGAAGAGG TTAAAAGCAA TGCAGTTCTA CAGGCTAGTT TGGAGCGACG GAAGAAGGCT TTGTACGGGC GGCGCCAGGC TCTAGAGCAA GATGTGGGAA GACTACAAGA ACAGTTGCAG CAAGAGAGAG ATAGGAAATT AGCTCTGGAA ACAGGACTGA ACATGTCAAA AGGGAATCAA CCTATTCCAG AAACAATCGA TGAAAATCTG AAGAAAGATC TGCAAGACGT AGCTCAGGCG GAGGCTGATA TTGCCAATTT AGAACATAAG GTTGATGATC TTGAAAATAG GCTTGGTCAA CATGACGGAA AAGCCTCTGG TTCCACGCAT GGTGCCAGCA AAGACTCTCG GAAAATGCCA GAGCACAGTG CAAAGATGAA GGAGAAACAA AAAGATACTG AAGCAGCCTC TACTCACATT TCTGAAAGGT CAACGTCCAA GACGGGTAAC ATATTGCAGG ATGGGCAAGG GGCTGCAAGA GAAAATGAGA CAGAGAAGCA ACATGATTCA CGGAGCAAAA GCTCGCAGCA CGAAACATCA CGTGGCAGCT CAAAACTGGT GGGCATGTCG AAGAGGTCTG GCACAAAGGG AGAGGGAAGC ACGACAACAA CTTCTGCGCT TTCCAAATTG ACAATGCGAC TCAACTTCCT AAAGGAGAGA CGAAGTCAGA TCGCGAACGA GCTCCAAAAC ATGGACAAAG GAAAAACATT AGGGCAATCC AGTCCATCCT CGGGGCAAAA CCGTGTATCA GAGGAAACTG AAAAAGGATC AGGGTCGAAC CAGGATTCAG ACAGCAGCAA ACTACAGAGC CCTCACATTC TTGACAGAGG AAGATCCGAG AACGGAGGAG GAGACAGAGG CAGAGGATCA TCTGGAGGAA GCCATCCCAA CACTACACCA AGGACCTTCT CGAGATGA |
| Length | 2778 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_7: 6997976.. 7004687 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT4G24580.1 |
| Description | Rho GTPase activation protein (RhoGAP) with PH domain |
| TAIR curator summary | Encodes a Rho GTPase-activating protein that interacts with ROP1 (a Rho GTPase) and regulates pollen tube development. This protein can be observed at the apical tip of growing pollen tubes and on endocytic vesicles traveling to this region of the pollen tube. |
| Alias | [REN1][ROP1 ENHANCER 1] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 33.1059 |
Ahg917658 | subtilase 4.13 |
| 50.636 |
Ahg950383 | Auxin efflux carrier family protein |
| 60.1332 |
Ahg488975 | Leucine-rich repeat protein kinase family protein |
| 68.7386 |
Ahg921560 | FBD, F-box and Leucine Rich Repeat domains containing protein |
| 74.2967 |
Ahg334832 | HCO3- transporter family |
| 80.2496 |
Ahg356111 | Tetratricopeptide repeat (TPR)-like superfamily protein |
| 80.8703 |
Ahg342312 | ERD (early-responsive to dehydration stress) family protein |
| 96.654 |
Ahg921700 | ENTH/VHS/GAT family protein |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|