Detail



ID : Ahg891090

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|891090|Al_scaffold_0007_3076
Sequence
ATGGCCTCTT TATTCTCTTC AGTTCTCTTG TCTCTTTGTA TACTCTCTTC ACCTTTTCTC TCAAACGCAA ACGCCAAATC AAAACTAGGC TTCACCGCCG ATCTGATCCA CCGTGATTCT CCTAAATCGC CATTCTATAA CCCGACGGAA ACCTCTTCCC AGCGTTTGAG AAACGCTATC CACCGATCCG TTAGCCGTGT TTTCCATTTC ACTGATATCT CTCAAAAGGA TGCATCGGAT AACGCACCAC AAATTGATCT CACCTCAAAT AGCGGTGAAT ATCTAATGAA CATATCTCTT GGAACACCTC CTTTCCCGAT CATGGCGATC GCTGACACCG GAAGTGATCT CCTGTGGACG CAGTGCAAAC CCTGTGATGA TTGTTACACT CAAGTTGATC CTCTCTTTGA CCCTAAAGCG TCTTCCACAT ACAAAGACGT TTCTTGCTCC TCAAGCCAAT GTACTGCCCT AGAAAATCAA GCCTCTTGTT CCACAGAAGA CAACACTTGC TCTTACTCAA CGTCTTACGG GGATCGCTCA TACACAAAGG GTAACATCGC CGTGGATACC TTAACGCTCG GCTCCACCGA TACCCGCCCG GTGCAGCTTA AGAATATTAT TATTGGTTGT GGTCACAACA ACGCTGGAAC GTTTAACAAG AAGGGCTCTG GAATCGTCGG ACTAGGTGGT GGTGCGGTTT CGCTCATCAC GCAACTTGGC GACTCCATCG ACGGTAAATT CTCATACTGC TTGGTTCCTC TAACTTCTGA AAATGATCGA ACGAGCAAAA TCAACTTCGG AACCAATGCT GTTGTGTCGG GAACAGGAGT TGTCTCAACT CCTTTGATCG CGAAGTCTCA AGAGACTTTC TATTATCTAA CCCTAAAATC TATTAGCGTG GGAAGCAAGG AAGTCCAATA CCCTGGCTCA GATTCTGGAA GTGGCGAGGG AAACATCATC ATTGATTCGG GCACAACCCT AACGTTGTTA CCCACCGAAT TTTACTCCGA GCTCGAGGAT GCGGTGGCTT CCTCAATCGA TGCTGAGAAG AAACAAGATC CACAAACCGG TTTGAGTCTG TGTTATAGTG CAACCGGGGA TCTGAAAGTT CCAGCCATTA CTATGCATTT CGATGGAGCA GATGTGAATC TGAAACCCTC CAATTGCTTT GTACAAATCT CGGAGGATTT GGTTTGCTTT GCCTTCCGCG GGAGCCCGAG TTTCTCCATA TACGGGAACG TGGCACAAAT GAACTTTCTT GTTGGATACG ACACTGTTTC CAAAACGGTG TCATTTAAGC CAACAGATTG TGCAAAGATG TAG 
Length1323
Protein Sequence
Protein Residue
Map Locationscaffold_7: 16814146.. 16815453
Download Sequence
A.thaliana
AGI-codeAT5G33340.1
DescriptionEukaryotic aspartyl protease family protein
TAIR curator summaryEncodes a protein with aspartic protease activity (also known as aspartate-type endopeptidase activity). Overexpression of the gene was shown to lead to salicylic acid (SA)-mediated disease resistance upon exposure to the pathogen Pseudomonas syringae. Moreover, overexpression of this gene led to the upregulation of two pathogenesis-related genes PR1 and PR2. This upregulation was no longer observed in transgenic lines expressing the bacterial NahG gene encoding a hydroxylase suppressing SA accumulation.
Alias[CDR1][CONSTITUTIVE DISEASE RESISTANCE 1]
Gene coexpression
MR
MR Locus Description
2.44949 Ahg938557
4.3589 Ahg354506 F-box family protein with a domain of unknown function (DUF295)
9.32738 Ahg472435 Galactosyltransferase family protein
10.7238 Ahg896274
11.225 Ahg951571 Protein of unknown function (DUF677)
11.9583 Ahg911831
14.4222 Ahg942791 Protein kinase superfamily protein
18 Ahg897135
18.8414 Ahg492896 iron regulated transporter 2
19.4422 Ahg916655 LOB domain-containing protein 5
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression