Detail



ID : Ahg891525

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|891525|Al_scaffold_0007_3511
Sequence
TATGCTCTCC AACAGGTTGA GGAGATTTAC AACTTTTCGC AAGATGACCT CTTAACTGAG GATATATATA TATATATACT AGACACCCAT GCTGAAGTTT TTGTCTGGGT TGGTCAATGT TTGGATCCCA AGGAAAAGCA AACTGTATTT GAGATTGGCC GAGAATACAT AGATCTTGCT GGATCCTTGG AAGGCTTGTC TCCTAATGTT CCACTCTACA AAATGAATGA AGGGAACGAG CCATGCTTCT TCACCACTTA CTTTTGTTGG GATCCCACTA AAGCAATCGC ACAAGGAAAC TCATTCCAGA AAAAGGCAGC GTTGTTATTT GGCACTCACC ACGTTGTGGA AGTACTACAC CTCTGCATTT TCAGTTTTGT TAATTAG 
Length387
Protein Sequence
Protein Residue
Map Locationscaffold_7: 20310094.. 20310763
Download Sequence
A.thaliana
AGI-codeAT2G41740.1
Descriptionvillin 2
TAIR curator summaryEncodes a protein with high homology to animal villin.
Alias[ATVLN2][VLN2][villin 2]
Gene coexpression
MR
MR Locus Description
1.41421 Virus0334
6.48074 Ahg928631 nuclear transport factor 2 (NTF2) family protein / RNA recognition motif (RRM)-containing protein
11.0454 Ahg938032 PIF1 helicase
16.2481 Ahg946057 RNI-like superfamily protein
21.7945 Ahg950804 Defensin-like (DEFL) family protein
22.2935 Ahg897888 cell division cycle 48
27.7489 Ahg948207
32.8634 Ahg937102 uridine 5'-monophosphate synthase / UMP synthase (PYRE-F) (UMPS)
33.1662 Ahg489986 Uncharacterised protein family (UPF0497)
43.7836 Ahg484333
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression