Detail



ID : Ahg891972

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|891972|Al_scaffold_0007_3958
Sequence
ATGAGAAGCT TTAATACATC TGACAGGCTA AGAAAGTTCC AGCGAAGGCT GCAACCAAGA AGCATGCTGC GGCTGCTGCT AAAAAGGCCA AGGTCTGAGA GTTCGTCTGA AGATGATTCA TCCTCTGATG AGGACTCAGA TGATGATTCT GAGGATGGGA AGGCTGCTGC TACCAAGGCT GCAAGTAGTT CAGATTCATC TGATGAAGAT TCTGATGAGG AAAGTGAAGA TACTACTGAA TGTCTTCATG GTGCAATTGC TATGGAGAAG ATGCGTTGGT GA 
Length282
Protein Sequence
Protein Residue
Map Locationscaffold_7: 22910873.. 22911376
Download Sequence
A.thaliana
AGI-codeAT1G48920.1
Descriptionnucleolin like 1
TAIR curator summaryEncodes ATNUC-L1 (NUCLEOLIN LIKE 1), the predominant form of the two nucleolin proteins found in Arabidopsis. This protein is involved in rRNA processing, ribosome biosynthesis, and vascular pattern formation. PARL1 localizes to the nucleolus and parl1 mutants accumulate elevated levels of the unspliced 35S pre-rRNA. parl1 mutants also have defects in cotyledon, leaf, sepal, and petal vein patterning and have reduced stature, reduced fertility, increased bushiness, and reduced root length. The sugar-induced expression of ribosome proteins is also reduced in parl1 mutants.
Alias[ATNUC-L1][NUC-L1][PARL1][nucleolin like 1][PARALLEL 1]
Gene coexpression
MR
MR Locus Description
1 Ahg932898 cyclin d5;1
1.73205 Ahg887843 lon protease 4
2 Ahg951014 structural maintenance of chromosomes 2
3.4641 Ahg948109 hydroxyproline-rich glycoprotein family protein
4 Ahg924807
4.58258 Ahg936309
6.7082 Ahg950084 Lipin family protein
8.3666 Ahg942073 zinc finger protein 3
8.48528 Ahg351537
11 Virus1117
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression