| Annotation |
|---|
| Description | jgi|Araly1|892294|Al_scaffold_0006_290 |
| Sequence |
ATGGAATGGT CAACAACGAG CAACGTACAA AACGAGAGAG TTGCTTTCAT GCCACCACCG TGGCTGGAGT CTAACTCCTT TAACTCGCTC CGCAGCTTCA ACTATGATTC TTACACAGCA GGAAATTCGT ATAAGTCTGC CACTACGCAA ACTGGACCGG TTATCCCTGT ACCGGAATCA GAAAAGATCA TCAATGCGTA CCAATGTCCG AGTAACAACA ATGAAATGAT AAAGAAGAAT AAGAGGCTAA CGAGTGAACA ATTAGCTTCG CTTGAACTAC GTTTTCAAGA GGATTTCAAA TTAGATTCCG AGAGGAAGCT GAAGCTAGCG AAGGAGCTAG GTCTGGAGCC ACGGCAGGTC GCGGTTTGGT TCCAGAACCG CCGTGCACGG TGGAAGGTGA AGCATCTCGA AGAGTCATAC GACTCACTTA GGCAAGAGTA CGATGCCATT TGGAGAGAGA AGCAGATGCT ACACGATGAG GTGAAGAAGC TGAGAGCTAT CATACTAAGA GATCAGGGTT TGATGATGAA CATCAACCAA ACCGCCGGAG GAGATCAAAC TATCGGTCTT GGTGATCAAT ACAATAGTCT GATGATGGTT GCTTCTTCTG GCTGGCCACC GATATCGCAG CCCCCAAACC CGTGGTAG |
| Length | 648 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_6: 1135976.. 1145077 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT5G03790.1 |
| Description | homeobox 51 |
| TAIR curator summary | Encodes a homeodomain leucine zipper class I (HD-Zip I) meristem identity regulator that acts together with LFY to induce CAL expression. It binds to the CAL promoter proximal CAATNATTG element. LMI1 acts primarily downstream of LFY in meristem identity regulation. The interaction between LFY, LMI1 and CAL resembles a feed-forward loop transcriptional network motif. The gene also had additional LFY-independent roles in leaf morphogenesis and bract formation. |
| Alias | [ATHB51][HB51][LMI1][homeobox 51][LATE MERISTEM IDENTITY1] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 23.3452 |
Ahg352546 | Terpenoid cyclases/Protein prenyltransferases superfamily protein |
| 29.2404 |
Ahg897438 | response regulator 21 |
| 39.6863 |
Ahg477249 | Cystathionine beta-synthase (CBS) family protein |
| 41.1582 |
Ahg317859 | Homeodomain-like superfamily protein |
| 49.8397 |
Ahg344061 | SU(VAR)3-9 homolog 7 |
| 53.6656 |
Ahg896956 | |
| 57.3236 |
Ahg915922 | Putative membrane lipoprotein |
| 60 |
Ahg479962 | Defensin-like (DEFL) family protein |
| 71.2881 |
Ahg921896 | |
| 84.3208 |
Ahg906168 | |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|