Detail



ID : Ahg892382

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|892382|Al_scaffold_0006_378
Sequence
ATGGATTCTT CAGCTTTCAG GAAAACAGTT TGGAAGAACC CTTTCAATTT CATCAACACA ATTAAGGTTC CTCGTGGCGG CCTAGGCGAC AGTTATTCAC ATGTAAAAGA AGTTACGAAT GATCTCATCA ATTCCCAGAT TCCGTCCATC AAACTTCACG AGAAGGTTAC AGATGTATAC TATGATTATA TGCAATTAAG TAAAGGAATA AGCCAAGGGA GTGTAGAAGT TGTGAAAGAT GTCTTGAACC GTCGGCCGGG CGCTGTGGAC GAATGGATAA ACCCTTATGA GACACCATTG TTGAAGGCTT GCGCATGTGG AAAACCCGAG ATTGTTAAAG AGCTTCTTCG TCGCATGAAA CCTGAACAAA TGCTTCCCAA GATGAGCCGT CACACTTCAT ACCACACACC TCTCACTGTT GTCGCAGTCA CCGGAAACAT GGAGATCGCC AAATACTTGC TTGACAAGAA CTTTGGGCTG CTAAAGATGC CAGACATAAA TGGACAGCTT CCGGCCGTGG TTGCAATTGA GAACGGGCAT AAAGAGATGG CTTGGTACTT TTACGTGCAA ACTATGCGTC CTCTGTTACT TGATCAAGAT GGGTACCACG GTACCTTGCT CATTATCAAC GCCATCTACT ACAAAATGAT TGACATTGCG CTGTATTTTC TCAGCGAAGA GACTCGCTAC AAAATGATCG ACATTGCGTT GTGTTTTCTT TGCGCAAAGA CACGCTACCT TGCCGTCACA AAACACTTGC AGATAGAGTC GACTCCCATC ATCGTTTTAG CTTCAAAACC GGACCTTTTT CCCAGCGGCT GCCGTCTCGG ACCATTGGAA CGCATTATAT ACGATTGTAT ACAAGTAAAG CTTCAGGCTA ATCCAGGTTG GTTTTATCCG AAAAAAGATC AGCAAACTAC CCTGATGAGG AAGCTGCTTA AGTGTCTCTC CAAATGGACT GGAATAGATG AAGTGTACCA ACTGAAGGTT ATGCATCTAC AAGCCAAGAA GCTTTTATTG GTAATATCAG AAGAAACACG GGCCATGGGA TTAAAGGAAC GTTCCGAGAC AGTGGGTGAG GCCTTACTCT TTGCAGTAAG GTATGGGAAT GTGGATTTCT TGGTGGAGAT GATCAAGAAC AACTCCGAGC TTCTATGGTC CACGAAAACG AGCTTGAGTA GAACTCTGTT TCTCTTGGCC GTCGAGTTGA GACAAGAAAA AGTGTTTAGT CTACTCTACG GTCTGGACGA TAGGAAGTAC TTGTTGCTTG TGGAAAGGGA CTGTGATGGC AATGGTATGC TTCATCTCGC CGGCTATCTT TCTCCTCCTT GCAAGCTCTC TACCGTTACT GGCGCAGCTT TGAAGATGCA ACGTGAGTTA CAATGGTTCA AGGAAGTGGA GAAAATTGTA CCAGAGATCG AGAAGCAGAG AGTAAACACA AGTGGACAAA CACCAATCGA GATATTCACA AAGGAGCACC AAACATTGCG GCAAGAAGCT GAGAAATGTA TGAAATACAC GGCGATGTCG TGCAGCTTAG TCGCGACTCT CATATTCACG GTCACCTTCG CGGCCGTCTT CACCGTCCCC AACTACAACT CACACGGCAA ACCCTTTCAC CTACGTGATC GTGCTTTCAC CACATTCGTC GTCTCCGATC TGATCTCCTG CTTCGCAGCT TGCACCTCCG TCCTCATTTT CCTCGGGATA CACACCGCAA GGTACTCCTT CGATGATTTC TTGTTCTCGC TACCGGCAAA GATGATCGCC GGACTCTCCA TACTGTTCGT TTCAATCGGG GCAATGCTTA TTGCCTTCTC GTCGGCCCTA TTCACGATGA TGGATAAAGA GAAATGGATC GTTGCTCCGA CGATCCTTCT CGCTTGTTTA CCGGCGCTGC TGTTTGTTCT GCTTCAGTAT CCTCTCCTCA AAGAAATGAT CTTTTCGACT TACGGTAAAG GAATCTTCGA CAGGACTTAA 
Length1980
Protein Sequence
Protein Residue
Map Locationscaffold_6: 1524207.. 1526889
Download Sequence
A.thaliana
AGI-codeAT5G04700.1
DescriptionAnkyrin repeat family protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
11.7898 Ahg341194 Homeodomain-like superfamily protein
12.083 Ahg471835 organic cation/carnitine transporter 3
25.5539 Ahg917426 ENTH/ANTH/VHS superfamily protein
27.8747 Ahg892041 cation/H+ exchanger 26
31.8904 Ahg316947 Pectin lyase-like superfamily protein
33.2265 Ahg497008 Protein phosphatase 2C family protein
34.0441 Ahg484753 pleiotropic drug resistance 10
34.0881 Ahg337040
34.641 Ahg936695 plastocyanin-like domain-containing protein
37.2022 Ahg917658 subtilase 4.13
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression