Detail



ID : Ahg471835

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|471835|fgenesh2_kg.1__1789__AT1G16390.1
Sequence
AAATCAATTC AAACATAAAA TTAAGTACAA AAGAAAACCC TATCTCTTCC TATATATGGC CGACTCGACA CGGCCGCTTC TCTCCGATTC CAACTCGTCC GAGTCAAATC TTCCACCACC AAAATCCCTT GACGAGACGA TAGAGCAATG CATCGGAAAC TTCGGGTGGG CACAATTCCT CCAAGCCGCT TTAGTCTCAT TCGCTTGGGT CTTCGACGCT CAACAAACAT TCATCACTGT CTTCACCGAC TCACAACCCA CATGGCACTG TACCGAATCG GAACGAGTCG ACTCAGTATG CAACACGTCA TCCTCCAACC TCTGCACCTT ACCCAACAAA ACCTGGTCTT GGGACTTCAA CCCTCACGTG TCAATCATTT CCGAGTGGGG GCTACAATGC GCCGGCTCGT TCCTCAAGGG GTTGCCTGCA AGCTCCTTTT TCCTTGGCTG TCTAATCGGC GGCTTAGTTC TTTCTACACT CGCCGACTCA TCGCTCGGTC GTAAGAACAT GCTCTTGTTG TCGTGTCTCA TAATGTCTCT TTCTTCGATG TTAACAGCTT TCTCAACGAG CATTTGGGTT TATGCGTTTT TGAGATTCTT GAACGGGTGT GGCCGAGCCA CGATCGGGAC TTGCGCGCTC GTTTTATCAA CGGAGTTAGT CGGTAAAAAA TGGCGAGGAA AAGTCGGTGC TATGGGTTTC TTTTGCTTCA CGTTAGGGTT TTTATCGCTG CCGATGTTAG GTTACATTAA TAACGGGAAT TCGTGGAGGT ATCTTTATGT TTGGACATCG ATACCGACTT TAATCTATTG CTGTTTAATT CGGATTTTCG TCAGGGAATC TCCTAGATGG CTTATCGTAA AGGGTCGTAA AGAAGAAGCC GTCTCAATTC TCCAAAGCAT TGCTTCTAAT GCAATCACTA TGAGCTTCAC GAACTTATGT TTTGATATAG AAGAGGATCA ATCCAAGTCA AATCCTGATG TTTACGACGC GTTAAAGATC TTGGTGAGGA AAAGTTGGTC GTTTAGGAGA TTATTAGCGG CAATGGTGGT TGGATTTGGT ATCGGTATGG TTTATTACGG AATGCCATTA GCTTTAACGA ATCTAAACTT CAATCTTTAC TTAGGTGTTG TATTCAACGC CTTGTCTGAG TTCCCAGCTT TTCTGATAAC GTTTTTCTTC ATTGATAAAA TCAATAGAAG AGATGCGTTG ATCGGATTTA CAGCTCTAAG TGGAATCTCT AGCGCTCTGA TCGCGGTGTT AGGACAACAA CTAGGGGCAT TACAGATTGT GTTAGAGCTC GTTTCGTTTT TCAGTGCGTG CACCGCATTT AACATGACGC TTATATACAC AATTGAGATG TTTCCGACAT GTGTGAGGAA CTCGGCGATT GCGATGGTGA GGCAGGCGCT GGTGTTTGGC GGCGTTTTTA GTCCAGTGAT GGTTGCTGCT GGTCGCGAAA ATCAGTTTTG GTCGTATGGG TTGTTTGGTT TGGTCATAGC ATTGTGTGGA TTGTTTGTGT TTGGATTGCC GGAGACTAGA GGAAGTGTTC TATGCGACAC TATGGACGAG GAGGAGTATA AGACTTTGGC AAAGAGACAA TTTATTGGTT GATAGTGTTG TCTTTTGCAG GCTTAAACCG TTTCGGTATT GATTCAAATG CCATTCTGGT TTTAATACTT ATGAAACCAC GTACGGGTTA ACTCCTTGCA TTACAAGTGA CTGTCTCCTC TATGATACCG GACCATAAAC CAAATTCATC CAACCATAAT TCT 
Length1773
Protein Sequence
Protein Residue
Map Locationscaffold_1: 6549835.. 6554178
Download Sequence
A.thaliana
AGI-codeAT1G16390.1
Descriptionorganic cation/carnitine transporter 3
TAIR curator summary
Alias[ATOCT3][OCT3][organic cation/carnitine transporter 3]
Gene coexpression
MR
MR Locus Description
4 Ahg341831
12.083 Ahg892382 Ankyrin repeat family protein
12.9615 Ahg478955 Serine/threonine-protein kinase WNK (With No Lysine)-related
12.9615 Ahg493720 Leucine-rich repeat protein kinase family protein
14.2829 Ahg951864
15.9687 Ahg486738 WRKY family transcription factor
16.7929 Ahg937812 Galactose oxidase/kelch repeat superfamily protein
17.088 Ahg477013 Terpenoid cyclases family protein
17.7482 Ahg351608 Protein of Unknown Function (DUF239)
18 Ahg922313 MAP kinase kinase 10
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression