Detail



ID : Ahg892794

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|892794|Al_scaffold_0006_790
Sequence
ATGGTACCTT TACGGCAATT TGTTCAGAAT TTCAGACTTT TGTCTGGTTT TGGAACTGAT CACAGGGTTT TTTTGGATGT TGTCAAAGCT TGTGCTTCAG TGTCTGAGCT CACATCAGGG AGGGCTCTGC ACGGTTGCGT GTTCAAGCTT GGTCATATAG CCTGCACTGA GGTCTCGAAG TCAGTTCTTA ACATGTATGC GAAATGCAGG AGAATGGATG ATTGCCAGAA GATGTTTAGG CAAATGGACA GTGTTGATCC TGTTGTTTGG AATATTGTTC TGACTGGACT TTCTGTTTCT TGTGGTCGTG AAACGATGAG GTTTTTCAAA GCAATGCACT TTGCAGATGA ACCTAAGCCC AGCTCCGTTA CCTTTGCGAT TCTTCTTCCT GTGTGTGTTC GCCTTGGGGA TTCATACAAT GGGAAAAGTA TGCATTCTTA TATTATTAAA ACCGGTTTAG AGAAAGATAC ACTTGTGGGG AATGCTTTGG TTTCCATGTA TGCCAAATTT GGGTATATTA TTCCTGATGC TTTTACTGCA TTTGATGATA TAGCTGACAA AGATGTTGTC TCATGGAATG CGATTATTGC TGGGTTTTCT GAGAATAAGA TGATGGCTGA TGCATTTAGA TCGTTTTGTC TAATGCTGAA AGAACCTACA GAGCCAAATT ATGCAACAAT TGCAAATGTT TTACCAGTTT GCGCTTCCAT GGGTAAGAAC ATTGCATATC GAAGTGGTAG ACAGATTCAC AGTTATGTTG TGCAGAGATC TTGGTTGCAA ACCCATGTTT TTGTATGTAA TTCACTTGTG AGTTTCTATT TGAGAGTCGG AAGAATAGAA GAAGCAGCCT CATTGTTTAC GAGGATGGGT TCCAAAGATC TGGTTTCATG GAACGTTGTC ATAGCCGGTT ATGCATCAAA TCATGAGTGG CTTAAAGCAT TGCAGTTATT TCACAACTTG GTGCAAAAGG GGGATGTTTC TCTTGATCCA GTAACTATTC TCAGCATCCT TCCTGTCTGT GCGCAGTTAA CTGACTTGAC CTGTGGGAAA GAGATCCACA GTTATATTTT GCGCCATTCT TACCTTTTGG AGGATACATC AGTTGGTAAC GCTCTCATTA GTTTCTATGC AAGATTTGGT GACACGAGTG CAGCATATTG GGCCTTTTCA CTGATGTCCA TGAAGGATAT AATATCTTGG AATGCTATAC TTGATGCCTT TGCAGACAGT CCAAAGCAGT TTCAATTTTT GAATCTCTTG CACCACTTAT TTAACGAAGC AATCACTCTT GACTCTGTTA CTATTTTAAG CCTACTCAAG TTCTGCACAA ATGTACAGGG AATTGGTAAA GTAAAAGAAG TTCATGGGTA CTCAGTTAAG GCTGGTCTTT TACACAATGA AGAGGAACCC AAGCTTGGTA ATGCATTGCT TGATGCATAT GCCAAATGTG GTAATGTTGA ATACGCTCAT AAGATTTTTC AGGGTTTATC AGAGAGGAGA ACTTTGGTTA CCTATAACTC ATTGTTATCA GGATATGTTA ATAGTGGAAG TCATGATGAT GCTCAGATGC TGTTCAGTGA GATGTCTACT ACTGATCTCA CCACTTGGAG TTTGATGGTT CGTATCTATG CTGAAAGTTG TTTCCCTAAT GAAGCCATTG GTGTTTTCCG TGAGATTCAA GCTCGAGGAA TGAGGCCTAA CACTGTGACT ATAATGAATC TCCTTCCTGT TTGTGCGCAG CTAGCCTCTC TGCATCTAGT AAGACAATGT CATGGATATA TTATTAGAGG CAGACTTGGT GATATCCGCC TGAAGGGGAC TCTACTAGAT GTATATGCTA AATGTGGCAG CTTGAAGCAT GCATATTCTG TCTTCCAGTC AGATGCTCGT AGAGATCTGG TTATGTTCAC TGCTATGGTA GCTGGGTATG CTGTACATGG TAGGGGTAAG GAAGCACTTA TGATCTTCTC TCATATGATT GACTCAAACA TAAAGCCCGA TCATGATGGA TTGCAAATAT ATGACTCAAT AAGGGCAGTT CACGGTATGA AACCTACAAT GGAACAATAT GCTTGTGCTG TAGATCTACT TGCTCGAGGG GGTCGACTTG ATGATGCATA TTCTTTCATC ACACAGATGC CAGTTGAACC CAATGCAAAT ATATGGGGAA CACTGTTAAG GGCGTGTACA ACCTATAATA GGATGGATCT GGGGCACTCA GTTGCAAATC ATCTTTTGCA AGCTGAATCT GACGAGACCG GAAACCATGT TCTAATATCG AATATGTATG CTGCAGATGC TAAATGGGAA GGCGTGATGG AGTTGAGAAA CCTAATGAAG AAAAAGGAAA TGAAAAAGCC AGCGGGATGT AGCTGGCTAG AAGTGGATGG GAAAAGGGAT GTTTTTGTGT CTGGAGATTG TTCTCACCCT CGTAGAGACA GTATTTTTGA CTTAGTCAAT GCTTTATATC TTCAGATGAA AGAGCCTGTG GTGTTTTAA 
Length2499
Protein Sequence
Protein Residue
Map Locationscaffold_6: 3306647.. 3309196
Download Sequence
A.thaliana
AGI-codeAT5G08490.1
DescriptionTetratricopeptide repeat (TPR)-like superfamily protein
TAIR curator summary
Alias[SLG1][SLOW GROWTH 1]
Gene coexpression
MR
MR Locus Description
13.4164 Ahg895912
15.8745 Ahg949136 Mitochondrial transcription termination factor family protein
24.98 Virus3224
25.9808 Ahg916358 low-molecular-weight cysteine-rich 1
27.3496 Virus2081
31.1288 Ahg918617 eukaryotic initiation factor 3 gamma subunit family protein
31.289 Ahg358384 calnexin 1
33.6155 Ahg928251
33.6749 Ahg919677 Plant self-incompatibility protein S1 family
39 Ahg898142 F-box associated ubiquitination effector family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression