Annotation |
Description | jgi|Araly1|358384|fgenesh1_pg.C_scaffold_8002171 |
Sequence |
ATGGAGGCAG AGAAATCCAA GAAAAATCCG GTTAAGAAGC CCGTAGAGGC AACAATGGAG CATGTGTTGG TGGCATTACG AGAGACCAAG GAGGAGAGGG AGACCAGAAT TCGAAAACTG TTCGAATTCT TCGACAATTC GAAGTTAGGG TTCTTAGACG ATACCCAGAT CGAGAAAGGT TTGTCTTCGC TTAGTATTCC TCAAAATTAT AGGTACGCTA GTGATTTTCT TAAAGTCTGC GACGCGAATC GAGATGGGCG TGTGGATTAC CAGGAGTTTC GTCGTTACAT GGACTCTAAG GAGCTTGAGC TCTACAAGAT CTTCCAGGCC ATTGATGTCG AACACAATGG CGACATTTGT CCAGAAGAGC TTTGGGAGGC TCTTGATAAA GCTGGCATTA AAATTAAAGA TGAGGAACTC GCTTCTTTTA TGGAGCATGT TGATAAGGAC AACAACGGAA TTATAACTTT TGAAGAGTGG AGGGATTTTC TTTTGCTTAA CCCTCATGAA GCCACAATTG AAAACATTTA TCATCACTGG GAAAGAGTAT GCTTAATTGA CATTGGGGAA CAAGCTGTTA TACCAGACGG TATAAGTACA CACGCTCAAA GAAGCAAATT ACTTCTCGCT GGAGGAATAG CAGGAGCTGT TTCTAGAACC GCGACTGCGC CTCTGGACCG TCTGAAAGTT GCTTTGCAAG TTCAACGTAC AAATTTGGGC GTTGTCCCGA CCATTAAGAA AATATGGAGA GAAGATAAGT TGTTGGGTTT CTTCAGAGGT AATGGGTTAA ATGTAACGAA AGTCGCTCCT GAAAGCGCCA TAAAGTTTGC TGCTTATGAA ATGCTTAAAT CCATAATTGG GGGAGTGGAT GGTGACATTG GTACAAGCGG GAGGCTTTTG GCTGGTGGAT TGGCTGGTGC AGTGGCTCAA ACAGCTATTT ATCCTATGGA TCTCGTGAAG ACTCGGTTAC AGACTTTTGT GAGTGAAGTT GGGACACCAA AGCTGTGGAA ACTCACGAAG GATATTTGGA TTCAAGAAGG ACCCCGAGCT TTTTACAGGG GTCTTTGTCC TTCTCTTATT GGGATTATAC CTTACGCAGG AATTGACCTT GCTGCTTACG AAACTCTTAA AGACTTATCA AGGTCACATT TTCTTCATGA CACTGCCGAG CCAGGTCCTC TCATACAACT GGGATGTGGA ATGACGTCTG GAGCTCTTGG AGCATCGTGT GTTTACCCAT TACAGGTCAT AAGAACAAGT TGTTCATATC TCTTGAAGCT GTGTAGAACC CTTAAGCATC TGCATCAATT TCACGCCCAA TTCATCACTT CGGGACGAAT CTCCAGTAGT CTCAACCAGA ACTCTGTTTT CGCCAATGTC CTCTTCGCCA TCACCTCTAT TTCACCGTCC GCGTCGACGT CGAATGTGGT CGTGAGCTAC GCGACTTCGG TTTTCAGATT CTTCACAAAC CCATCAACGT TTTGCTTCAA TACGATCATT AGGATTTATA CGCTTCATGA GCCGTTGTCT CTCTCTTCTC AACGTTTCTT CGTGGAGATG CGACGTCGCT CTGTTCCTCC CGATTTCCAC ACTTACCCTT TCGTATTCAA GGCTTGTGCA GCAAAGAAGA ATGGTGATCT TTCATTAGTC AAGACTCTGC ATTGTCAAGC TTTGAGATTC GGATTGTTAT CTGATTTGTT CACTCTCAAC ACTCTGATTC GGGCTTACTC ATTGATGGCC CCAATCGGTA GTGCCTTGCA GCTGTTCGAC GAAAATCCTC AAAGAGATGT TGTTACCTAC AATGTGTTGA TCGACGGGTT AGTGAAGGCA TGTGAGATTG TTCGTGCAAG AGAGTTATTC GATTCAATGC CCTTTCGCGA TTTGGTTTCT TGGAATAGTC TCATTGCTGG GTATGCACAG ATGAATCAGT GCAGAGAAGC AATCAGTCTC TTCGACGAAA TGATTGGTTT GGGCTTAAAA CCTGATAACG TCGCCATTGT TTCAACTCTT TCAGCTTGTG CACAATCAGG GGATTTGGAA AAAGGGAAAG CTATTCATGA TTACACGAAA AAGAAGAGAC TTTTCATTGA TTCGTTCTTA GCTACTGGAT TGGTGGATTT CTATGCAAAA TGTGGCTTCA TCGACACAGC GATGGAGATC TTCCACTTAT GTTCAGATAA AACTTTATTC ACATGGAATG CAATGATCAC TGGTCTTGCA ATGCACGGTA ACGGCGAGCT AACGGTTGAT TACTTTCGTA AGATGGTTAG TTCTGGAATC AAACCAGACG GAGTTAGCTT CATAAGTGTT TTAGTGGGCT GCAGCCATTC TGGTCTAGTT GATGAAGCCA GAAAGCTTTT CGACCAGATG AGATCTTTGT ATGATGTTGA TAGAGAGATG AAACATTACG GGTGTATGGC GGATTTGCTT GGAAGAGCAG GGTTGATCGA AGAAGCAGCG GAAATGATCG AGCAAATGCC TAAAGATGGA GGAAAAAGAG AGAAACTATT AGCATGGAGT GGTTTGTTAG GAGGATGTAG AATCCACGGG AACATAGAAG TCGCAGAGAA AGCTGCAAAG CGAGTCAAGG CGTTGAGTCC CGAGGATGGA GGAGTGTATA AAGTTATGGT GGAAATGTAT GCAAATGCAG AAAGATGGGA GGATGTAGTT AAGGTTAGAG AAATGATCGA AAGGGACAAG AAGGTTCTTT ATGAGTCTTT CGATGAGCCT TTTGATGGTC GCTGGATCGT TTCGAAGAAT AGTGATTACG AAGGTGTATG GAAGCATGCA AAGAGTGAAG GACATGAAGA TTATGGACTT CTCGTGAGTG AGAAGGCTAG AAAGTATGGG ATTGTGAAAG AGCTTGACGA GCCTCTAAAC CTCAAGGAGG GAACTGTTGT TCTTCAGTAC GAGGTTCGTT TCCAGGAAGG ACTTGAGTGT GGAGGTGCTT ACTTGAAGTA CCTCCGTCCT CAAGAAGCTG GATGGACACC TCAGGGATTC GATAGTGAAT CCCCTTACTC TATCATGTTT GGGCCTGACA AGTGTGGAGC TACAAACAAA GTGCATTTCA TCTTAAAGCA CAAGAATCCC AAGAGTGGCG AGTACGTTGA ACACCATCTG AAGTTCCCTC CCTCTGTTCC TTATGACAAG CTTTCCCATG TCTACACCGC CATCTTGAAA CCCGACAACG AGGTTAGGAT TTTGGTTGAT GGAGAGGAGA AGAAAAAGGC CAATTTACTC TCTGGTGAAG ACTTTGAGCC TGCATTGATC CCTGCCAAGA CCATCCCTGA CCCTGAAGAC AAGAAACCAG AAGACTGGGA CGAAAGAGCC AAGATTCCCG ATCCAAATGC CGTGAAACCT GATGACTGGG ATGAGGATGC ACCCATGGAG ATCGAAGATG AGGAAGCTGA GAAACCCGAA GGATGGTTAG ATGATGAGCC TGAGGAGGTC GATGACCCCG AAGCGACCAA GCCTGAAGAT TGGGATGATG AGGAAGATGG TATGTGGGAG GCTCCTAAGA TTGACAACCC CAAATGTGAA GCAGCACCAG GTTGTGGTGA ATGGAAGAGA CCAATGAAGA GGAATCCTGC TTACAAGGGA AAATGGAGTT CACCTCTTAT TGATAACCCG GCTTACAAGG GAATCTGGAA ACCCAAAGAT ATTCCTAACC CTGACTACTT TGAGCTAGAC AGACCCGATT ACGAACCCAT TGCAGCCATC GGTATTGAGA TCTGGACAAT GCAAGATGGT ATCTTGTTTG ACAACATCTT GATAGCGAAG GACGAGAAGG TCGCTGAGAC TTACAGACAG ACCACTTGGA AGCCCAAATT CGATGTTGAG AAAGAGAAAC AAAAGGCAGA AGAGGAAGCT GCTGGCTCTG CAGATGGTCT CAAGAGCTAC CAGAAGGTTG TTTTCGACCT CTTGAACAAG GTTGCAGATT TATCTTTCCT AAGTGCCTAC AAGTCTAAGA TCACGGAACT GATTGAGAAA GCTGAGCAAC AACCAAACTT AACCATTGGT GTCCTCGTCT CCATTGTGGT TGTATTCTTC TCGCTCTTCC TCAAGCTTAT CTTTGGTGGC AAAAAGGCGG CACCTGTGGA AAAGAAGAAA CCAGAAGTAG CAGAGAGTTC AAAGAGTGGG GATGAGGCGG AGAAGAAGGA AGAAACCGCG GCACCACGCA AAAGGCAACC GAGACGTGAT AATTAG |
Length | 4206 |
Protein Sequence | |
Protein Residue | |
Map Location | scaffold_8: 18974732.. 18981321 |
Download Sequence |
|
A.thaliana |
AGI-code | AT5G61790.1 |
Description | calnexin 1 |
TAIR curator summary | |
Alias | [ATCNX1][CNX1][calnexin 1] |
Gene coexpression |
MR |
MR | Locus | Description |
10.583 |
Ahg479935 | Tetratricopeptide repeat (TPR)-like superfamily protein |
16.7929 |
Ahg489405 | AP2/B3-like transcriptional factor family protein |
16.8819 |
Ahg495472 | ribosomal protein L11 methyltransferase-related |
17.2047 |
Ahg356455 | Leucine-rich repeat (LRR) family protein |
31.289 |
Ahg892794 | Tetratricopeptide repeat (TPR)-like superfamily protein |
56.1783 |
Ahg488464 | Peptidyl-tRNA hydrolase family protein |
57.4456 |
Ahg496414 | Tetratricopeptide repeat (TPR)-like superfamily protein |
57.7581 |
Ahg491529 | neurochondrin family protein |
68.6731 |
Ahg950365 | CCCH-type zinc finger family protein |
70.9436 |
Ahg934382 | Pentatricopeptide repeat (PPR) superfamily protein |
|
RNA-seq |
Seasonal expression (July 2011 to June 2013) |
|
The four seasons |
|
Growth Chamber expression |
|