Detail



ID : Ahg893001

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|893001|Al_scaffold_0006_997
Sequence
ATGGCAAGAG TCGTCGAATC GGATTCGAGT TCGGGTTGTT CCAATGTACT GAGTCTTGAC TCGATTAGAG AATCGTTGAA TAGACAAGAA GACACCATCG TCTTCAGCTT GATAGAGAGA GCTAAGTTTC CACTCAATTC CCCTGCATTC GAAGAATCTC GTTGTCTAGA TTCTGGAAAT TCCTCTTCTC TCACTGAGTA TTTTGTCAGA GAGATAGAAA CCATCCAAGC TAAGGTAGGA AGATATGAAA ACCCGGAAGA GAATCCTTTC TTCCTAAAGA ACATTCCTCA CGCGGTATTT CCTACGCACA AATATCCACC GGCTTTGCAC CCTAAGGCTC TATCCGTTAA CATAAACAAA CATATTTGGG ATGTTTACTT TAAAGAATTG CTTCCTTTGT TCGTCAAACC TGGCGATGAT GGCAACTATC CATCAACTGC TGCTAGTGAT CTTGCGTGTT TACAAGCTCT TTCAAGAAGG ATTCACTACG GTAAATTTGT TGCCGAAGTC AAATTCAGAG ATGCTCCTCA AGATTACGAG CGTGCGATTC GAGCTCAGGA TAGAGAGGCT TTGATGAAGC TTTTGACGTT TGAGAAAGTA GAAGAAATGG TTAAGAAGAG AGTGCAGAAG AAAGCAGAAA CGTTTGGACA AGAAGTAAAA TGCATCACTG ACTCTGGTGA TGAGAGTAAG AAGAAGTATA AAGTGGATCC ATTACTTGTC TCTCGCATCT ATGGAGAATG GCTTATCCCT CTCACTAAGC TCGTTGAGGT TGAATATCTT CTACGTCGTC TCGATTGA 
Length798
Protein Sequence
Protein Residue
Map Locationscaffold_6: 4171952.. 4173498
Download Sequence
A.thaliana
AGI-codeAT5G10870.1
Descriptionchorismate mutase 2
TAIR curator summaryEncodes chorismate mutase AtCM2.
Alias[ATCM2][CM2][chorismate mutase 2]
Gene coexpression
MR
MR Locus Description
38.7685 Ahg944394 Basic-leucine zipper (bZIP) transcription factor family protein
46.3897 Ahg485066 phosphatidylglycerolphosphate synthase 1
56.0714 Ahg471543 QUASIMODO2 LIKE 1
64.7843 Ahg936279 Integrase-type DNA-binding superfamily protein
67.0075 Ahg475221 plus-3 domain-containing protein
86.7756 Ahg480231 cycloartenol synthase 1
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression