Detail



ID : Ahg893903

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|893903|Al_scaffold_0006_1899
Sequence
ATGGTTCCCG AAGATGAGAA ATCTCTGGAG CTCTTCCTCT GCATTGGTTT GGACGAGCGA ACCGCACGCG ACATTGTGAA AAACAACAGA AATCTCACCT CCGATCTCAC TGCCCTCATC CATCAGGCTC GTGTCACTGA TGGATGTGAC CGAACTACTG GAATTCTATT GTACTGGGTC GTTACTAAGT ACGGTGGAAA GGCTCTCGTG CATCGTCCTA CATTGCTCGA GTACATTGTC TCTTCTAAGA TTAAAACATC GTCCCAGTTG GATGCTGCAT ATTCGTTTTT TGGCAATACT GCGGTTGAAG TTTCCCCAGA AGATATTGAG AAAACAGTCA AACAAATCTT TGAAGAAAAT ATGAAAACAA TATTGGAGCA GCGGTCCAGA ACTAGTGTGG GTAAATTAAC CGGACATGTC CGGAAAAGTT TGCCATGGGC AGATCCTGAG ACTGTTAGGA GAGTCATAGA AGAAAAACTG TATGCATTGC TTGGCGAGAA AACAGCTGCT GACAATGAGA AACCTACAAA AAAGAAGGAG AAGAAAGAGA AGCCCACCAA AGTAGAGAAA GCTGTTTTGG AAGCTATCCC ACATCCATCT GAAGAGGAGC TTAATCCATA TTCTATATTC CCTCAGCCAA AGGAAAATCT TAAGGTTCAC ACAGAAGTGC TTTTCAGTGA CGGCTCTGTG CTCATATGTA GCAATACCAA GGAAGTGCTT GACAAACATC TCAAGGTGAC TGGAGGGAAA GTTTATACCC GGTTCCCTCC TGAACCAAAT GGTTATCTCC ATATAGGACA TGCAAAGGCT ATGTCTGTTG ATTTTGGTCT TGCAAAGGAG CGAGGGGGCT GGTGTTATCT GAGGTACGAT GATACAAATC CTGAGGCGGA AAAGAAAGAG TATATTAGTC ACATTGAAGA AATTGTTAAT TGGATGGGTT GGGAACCCTT CAAGATTACA TACACCAGTG ATTATTTCCA AGAATTGTAT GATTTGGCAG TGGAGTTGAT TCGAAGAGGT CACGCTTATG TTGATCATCA GAACGCTGAG GAGATAAAAG AGTACAGAGA GAACAAAATG AACAGCCCCT GGAGGGAAAG GCCTATTGAA GAATCTCTAG AGCTTTTTGA CGAAATGAGA CGAGGAATGA TCGACGAGGG AAAGGCCACA CTAAGATTAA AGCAAGACAT GAAGAGTGAT AATTGTAATA TGTATGACCT TATTGCCTAT CGTATAAAGG CAAGTGAAAC TGGAATCATC TCTGGTTACT TCACACCCCA TCCTCATACT GGTGACAGAT GGCGTATCTA TCCGACCTAT GATTATGCCC ACTGCATTGT TGATTCTCTT GAAAATATAA CACATTCGCT CTGCACTCTT GAATTTGAGA CCAGACGTGC TTCTTACTAT TGGTTATTAC ACTCGCTGGG TCTCTACATG CCGTATGTGT GGGAGTATTC GCGGTTGAAT GTCACAAACA CTGTTATGTC CAAGCGTAAG CTGAACTACA TTGTGACAAA CAAGTATGTT GATGGTTGGG ATGATCCACG TCTTTTAACA CTTGCTGGTT TGAGGCGGAG AGGTGTAACT CCTACTGCGA TTAATGCATT TGTACGAGGA CTTGGAATTA CCAGAAGTGA TGGTAGCCTG ATACATGTGA GTCGTCTTGA GCATCATATT AGAGAGGAGT TGAATAAAAC AGCTCCCCGC ACCATGGTGG TGCTGAATCC TCTTAAGGTG GTTATCACCA ATTTGGAAGC AGACAAGGTT ATGGAGCTTG ATGCTAAAAG ATGGCCTGAT GCTCAGAACG ATGATCCCTC AGCATTCTAC AAGGTTGCGC TCTCTAGAGT TATATACATT GAGCAATCTG ACTTCCAAAA GGAGGATTCA AAAAATTATT TTGGACTTGC CCCTGGTAAA TCAGCCTTGC TTCGATACGC TTTCCCAATC AAGTGCACCA ACGTTGTCTT TGCTAATGAC ACTGAAACCG TTTGTGAGAT TCATGTGGAG TATGATCCTG AGAAAAAGAT AAAGCCAAAG GGTGTTCTAC ACTGGGTCCC TGCATCTTCA CCAGGAAAAG AGCCCATTAA GGTTGAAGTC CGTTCATTTG AGAACCTCTT TAATTCCGAG AACCCAGCTG AACTCAATGA TGATTGGCTC ACCGACATTA ACCCCAACTC CAAAGTGGTA GTTTCTGATG CCTATGCTTT ATCAACCATT AAAGATGCTG CCGTTGGGGA CACATTCCAG TTCGAGAGGC TAGGTTATTA CACGGTTGAC AAGGACTCTA AACCGGGAAA GCTTGTGTTT AACCGGACGG TCACGCTCAA AGACGGCTAC AAGAAAGGTG GGAAATAG 
Length2358
Protein Sequence
Protein Residue
Map Locationscaffold_6: 7951792.. 7956730
Download Sequence
A.thaliana
AGI-codeAT1G25350.2
Descriptionglutamine-tRNA ligase, putative / glutaminyl-tRNA synthetase, putative / GlnRS, putative
TAIR curator summary
Alias[OVA9][ovule abortion 9]
Gene coexpression
MR
MR Locus Description
11 Ahg314711 HSP20-like chaperones superfamily protein
15.8745 Ahg947286 Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger protein
15.8745 Ahg477806 D-aminoacid aminotransferase-like PLP-dependent enzymes superfamily protein
18.735 Ahg487340 Peptide-N4-(N-acetyl-beta-glucosaminyl)asparagine amidase A protein
19.0788 Ahg477982 PAPA-1-like family protein / zinc finger (HIT type) family protein
27.7489 Ahg479008 Tetratricopeptide repeat (TPR)-like superfamily protein
27.8568 Ahg928456 Galactose oxidase/kelch repeat superfamily protein
30.1993 Ahg489762 ORTHRUS-like
30.9839 Ahg318665 SWIB complex BAF60b domain-containing protein
31.4166 Ahg923871
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression