Detail



ID : Ahg894282

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|894282|Al_scaffold_0006_2278
Sequence
ATGGGAGATA TGAGAAGCTT AGTGAAGATG TTAATGGTGG TTCTATTTCT AGGATGGATT TTTATTTGGA TTATGATTTC AACTGATCTT TACAAAAGTA AATGGACTCC AAAACTCGCC AAGAATCTCA ATACTACTTA TTTTGGCCCT CAAGGCATGA ATCTTGTGCT ACTCACAGTT CCAATGATGT TTATTGCGGT TCTGAGTTGT GTTTATTTGC ATACCCAGAA GAAACCAACC CAACCTCAAA GAGAATGGAA ATTAAAAGGG AGAATGGGAA GGGTAATAAT GGTGATGAAC CCATTGGGGA TAGTAACGGC CACAGAGTTG ATCTTTTCTC TGTTGTTCGT GGCTCTTTTG ATTTGGGCTC TCTCTAGTCA TCTATACCTT AGCTATCACG TCCACCTTCA TAACCACGAC AACGCCAAAA TATGGCAGGC AAAGTTTAGG GCTTTTGGAC TGAGAATAGG ATACGTGGGA CACTATTGCT GGGCCTTTTT GTTCTTCCCG GTGACAAGAG CCTCTACGAT TCTGCCACTT GTTGGGTTGA CTTCGGAGTC AAGCATCAAA TATCATATTT GGCTCGGACA TGTCTCAAAC TTTCTCTTCC TTGTTCACAC CGTGGTTTTC CTTATCTACT GGGCCATGAC CAATCAGTTG ATGGAGACGT TTGCATGGAA TCCGACATAT GTGTCTAACC TAGCCGGAAC AATAGCGATG GTGATTGGAA TTGCGATGTG GGTGACGAGT TTACCATCCT ATAGACGAAA GAAGTTCGAG CTTTTCTTCT ACACTCACCA ACTCTACGGT CTCTACATAA TCTTCTACGT AATGCATGTG GGAGACTCGT GGTTCTGCAT GATCTTGCCA AACATCTTCC TCTTCTTCAT CGACCGCTAC TTGAGATTCT TACAATCCAC CAAGAGATCC AGACTTGTTT CTGCTAAGAT CTTACCTTCA GACAACCTCG AACTCACTTT CGCCAAAACT TCAGGCGTAC ATTATACCCC AACAAGCATA TTGTTTCTAC ATGTGCCGAG CATTTCCAAG CTTCAATGGC ATCCATTCAC AATAACTTCG AGCAGCAACT TAGAGAAAGA TACGCTAAGT GTTGTGATCA GGAGACAGGG AAGTTGGACT CAAAAGCTTT ACACACATCT CTCTTCTTCC ATTGATTCTC TCGAAGTTTC TACTGAAGGT CCTTATGGCC CTAACTCTTT TGATGTCTCG AGGCATGGCT CTCTAATACT AGTGGGCGGT GGTAGCGGAG TTACACCCTT CATTTCGGTG ATCAGGGAAC TCATATTTCA GAGCCAAAAC CCGAGCGCAA AACTACCAAA TGTTCTCCTT GTTTGTGCCT TTAAACATTA CCATGATCTT GCGTTTTTAG ACTTAATCTT CCCATCAGAT ATATCAGTCT CGGACATTTC TAAGCTAAAT CTCCGAATTG AGGCCTATAT TACAAGAGAA GACAAGAAGC CCGAGACAAC TGATGATCAC AGACTTCTTC AGACAAAATG GTTCAAACCA CAGCCTCTAG ACTCCCCTAT CTCACCTGTT CTTGGACCCA ACAACTTCCT CTGGCTCGGA GTCGTGATTT TATCATCATT CTTCATGTTT CTCTTGCTCA TAGGGATTGT CACACGTTAC TATGTATACC CTGTTGATCA TAACACAGGA AAGATCTACA ATTTCTCGTA TAGAGCGCTT TGGGATATGT TCCTAGGATC TGTGTGCATT TTCATCTCTT CAAGCATAGT TTTCTTATGG CGCAAGAAAC AGAACAAAGA AGGAGATAAG GAGTCCAAGA AGCAGGTACA GAGCGTAGAG TTTCAGACTC CCACGTCTTC TCCAGGTTCA TGGTTCCACG GCCACGAGAG AGAGCTCGAG AGCGTTCCCT ATCAATCCAT AGTACAAGCC ACTTCAGTCC ACTTCGGCTC CAAACCTAAT TTGAAAAAGA TTCTATTTGA GGCAGAAGGT TCCGAAGACG TTGGGGTGAT GGTTTGCGGA CCAAGAAAGA TGAGACATGA GGTTGCAAAG ATATGTTCAT CTGGTTTGGC TAAGAACCTT CACTTTGAGG CAATTAGTTT CAACTGGTGA 
Length2100
Protein Sequence
Protein Residue
Map Locationscaffold_6: 9768331.. 9777793
Download Sequence
A.thaliana
AGI-codeAT5G23980.1
Descriptionferric reduction oxidase 4
TAIR curator summaryEncodes a ferric chelate reductase that is expressed at low levels in roots,shoots and cotyledons, but not flowers. Its transcription is regulated by FIT1.
Alias[ATFRO4][FRO4][ferric reduction oxidase 4]
Gene coexpression
MR
MR Locus Description
4.24264 Ahg890302 E2F/DP family winged-helix DNA-binding domain
9.69536 Ahg313754 beta-galactosidase 15
29.6985 Ahg481495 acireductone dioxygenase 3
32.8634 Ahg924238
46.8615 Ahg928995 myb domain protein 67
53.5257 Ahg334832 HCO3- transporter family
63.4035 Ahg479584 COBRA-like protein 10 precursor
64.2262 Ahg916639
67.4685 Ahg496052 copper transporter 3
67.8233 Ahg938703
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression