Detail



ID : Ahg895014

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|895014|Al_scaffold_0006_3010
Sequence
ATGGATTTTG GGTTTTTTCC TGGTGATTTG AGACAAAGAG GTTCATTTAC TGATCTGGGT TTTGGTGGGT TTCCTTTAAC TTCTTCTTCT TCTGTCTCTA ATGGAGGATT TCACTTTTCC GGTGACCGTA CAACAAACCC TTTTCTGAAC CTTCGAAAGC TTGATACGAC GGCGTTAATG GCGGATGGTG GTGATATGGG TTTGTGTCAA AACCTCAGTA AAATGAGTAT TTCCGATGAA AGAAGCAGTT TTTTCAACCA CTCTGGTTTT TCCGGCTATG GATGTTCTAG GTTTGACCAA GCTCGTGAGA GCTTTAATGG CGAAGCTTCT GGTTTTGTTG GTTATGGTGA TGTTCATAGA TTCGAACAGG ATCTGAGAGT GAGAGGTCGG CGTGAAGGTT TTGCACAGAG CTTTCATGGT GGATCTTCTA TGAGTGGTTA TGTTGGTGAT GGTGATTATC ATAGACTCAG ATTGCTTGCC TTACAAGAAG CTTATAACCC TAACCCTAGC TTTAACCATC ACAGAGGTTT TACAGAGAAC AACATGTCTC TTCATAACAG AGATTACATG TTAGAGTTGG AGCATTTCAA TCAACAAATC CGACGAGACT TTTCACTACT TCCACAGAAA TCTCGATTAG CTTTCCATGA AGACAGGATC TTTCCACCAT TTTCAGCCAT GGGAGGTTCT AGAGAGCTTG AGGGTTCTAC TAAGACGTTT TTTAAGGAAG ATTCACTGGA TTTGCCTCTA GATCTTGCTT CTATGGTTGA TATCTATGGT TCTGTGTGCT TAATGGCAAA AGATCAATTG GGTTGTCGAT TCTTACAGAA GTTTGTGGGA GAAGGAAGAT TTGTTGATGT AATGATTGTA TTTAAGGAAG TCATTAATCA TATCGCTGAG CTTGGAATAG ATCCGTTTGG TAACTATTTT ATCCAGAAGC TTCTTGAAGT CTGCAATGAA GAACAAAGAA CTCAGATTCT CATTAGGTTG ACTTCAAAAC CTGGACTTCT TATCAAAATC TCCATCAACA ATTATGGGAC ACGAGTGGTG CAGAAGTTGA TTGAGACTGT GACTACAAAG GAGCAAATCA GTCTGGTTAA GTCAGCTCTT GTACCGGGAT TTCTCTCTCT GGTTAGAGAA TTAAATGGAA ACCATGTGAT ACTAAATTGC TTGAAATTCT TTGGTCCTAA TGATAACAAG TTCATTTTAG AGGCTGCTAT TAAGTTCTGC ACAGAGATTG CGACTCATCG CCATGGATGT TGTGTGCTTC AACGCTGCGT TTCATACTCG GTTGGGGAGC AACATGAGAA GCTTGTTGGT GAAATATCCA GAAACTCTCT TCTCCTTGCT CAAGACCCTT ACGGGAACTA TGTGGTGCAA TACATAATAG AGAAGAAGGT GGGAGGAGTG AATGTGATGT TTGAGCTACG AGGGAATTAC GTGAAATTAG CTACACAGAA GTTTGGTAGC CATGTGGTGG AGAAATGCAT CAGATTTTAT CCCGAAAGCA GATCTCAGAT TGTGCACGAG CTCGTCTCTG TTCCAAACTT CGAACAGCTT GTTCAAGACC CTTACGCTAA CTACGTTATC CAATCTGCTC TATCCAAAAC CAAGGTTAGT TAG 
Length1623
Protein Sequence
Protein Residue
Map Locationscaffold_6: 17988639.. 17991116
Download Sequence
A.thaliana
AGI-codeAT4G08840.1
Descriptionpumilio 11
TAIR curator summaryEncodes a member of the Arabidopsis Pumilio (APUM) proteins containing PUF domain (eight repeats of approximately 36 amino acids each). PUF proteins regulate both mRNA stability and translation through sequence-specific binding to the 3' UTR of target mRNA transcripts.
Alias[APUM11][PUM11][pumilio 11]
Gene coexpression
MR
MR Locus Description
23.5797 Ahg316416 HCO3- transporter family
25.8457 Ahg314065
33.8821 Ahg942435 Galactose oxidase/kelch repeat superfamily protein
37.9868 Ahg930671
41.1339 Ahg943168
48.1871 Ahg476536 CLAVATA3/ESR-RELATED 13
48.3425 Ahg471835 organic cation/carnitine transporter 3
50.6656 Ahg475240 AGAMOUS-like 55
50.7543 Ahg899734
57.9655 Ahg329301 Cysteine proteinases superfamily protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression