Detail



ID : Ahg896372

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|896372|Al_scaffold_0005_338
Sequence
ATGACTACTT TGTCAAAGAT TCTATGTGTG TTGATCGTTC TTCTTTTATG TTTCTCCTTT CGATATTCAC TTCATGAAGA TGGGAATCAA CAGTCAAGCC ATGACTTCGT TTCAACTGCC AAGGCGACGA CTGAATATGG TGATGTGATA AAGAAGATGA TAGGAGGAAG AAAATTGATG ATAGCAAATG GAAAAGAAGA AGAAGAAGAA ACGACAATGA AGAGAGGCAA TAGAGAGACA GAGAGAAAAG CAAGCAAAAG TGTTGAAGAG GATGGACTCG TTGCTTACAC TGCTGATTAT TGGAGAGCTA AGCATCATCC TCCCAAGAAC AACTAA 
Length336
Protein Sequence
Protein Residue
Map Locationscaffold_5: 2009162.. 2010189
Download Sequence
A.thaliana
AGI-codeAT2G04025.1
Description
TAIR curator summaryEncodes a root meristem growth factor (RGF). Belongs to a family of functionally redundant homologous peptides that are secreted, tyrosine-sulfated, and expressed mainly in the stem cell area and the innermost layer of central columella cells. RGFs are required for maintenance of the root stem cell niche and transit amplifying cell proliferation. Members of this family include: At5g60810 (RGF1), At1g13620 (RGF2), At2g04025 (RGF3), At3g30350 (RGF4), At5g51451 (RGF5), At4g16515 (RGF6), At3g02240 (RGF7), At2g03830 (RGF8) and At5g64770 (RGF9).
Alias[GLV7][RGF3][GOLVEN 7][root meristem growth factor 3]
Gene coexpression
MR
MR Locus Description
14.1067 Ahg358487 Protein with RING/U-box and TRAF-like domains
17.3205 Ahg944795
27.1662 Ahg911743 fatty acid biosynthesis 1
32.4037 Ahg922302
40.0999 Ahg900378
42.8252 Ahg938540 Pre-mRNA-splicing factor 3
50.0799 Ahg355455 DNA (cytosine-5-)-methyltransferase family protein
73.6071 Ahg908165
79.2212 Ahg914329
85.0882 Ahg936611 P-glycoprotein 17
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression